| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_1771 |
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| Symbol | |
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| ID | 8447373 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | - |
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| Start bp | 1940433 |
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| End bp | 1942676 |
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| Gene Length | 2244 bp |
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| Protein Length | 747 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 645040897 |
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| Product | glycoside hydrolase clan GH-D |
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| Protein accession | YP_003201150 |
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| Protein GI | 258651994 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3345] Alpha-galactosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.145856 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.079989 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTTCAC CCGCCACGAC TTCCACCGTC AATGAGGCCG CGAGGCCGGC CGACCTCGGA
TTGAACCACC CCGGTTCGGC GGTCCGGCAC CTGCGAGCCG CCGGGGTCAG CGTGGTGATC
GACTGCCGCG GGCCGCGTCT ACCGCGCATC GTGCACTGGG GCGCCGACCT GGGCGATCTC
GACCGGACCA CGCTGGACAA CCTGGTTCGA GCCGATGTGC AGGCCGTGGT CAGCAATGTT
CCCGACCAAC CGATCAGCCC TGGACTGCTC GCCGAACACT CGACCGGCTG GTTGGGACTG
CCCGGCCTGC TCGGACACCG TGCCGGCCAT CAGTGGTCGA CCCTGTTCGA CGTGACGACC
GTCAGCTCGA GCAACGACCG GGACGGAACC CGACGCGTCG TCGTCGACGC AGCGGATCCG
GACGCCGGCC TGCGCCTCGT GCTGACCCTG GAGCTGTTGC CGGCCGGGGT GCTTCGCACC
CGAGCCACCC TGACGTCGAT CGCCGACCAG GCCGGCGCGC CCTACACCGT CGACGGGCTG
GCCCTGTCGC TTCCGGTCCC GACCCGTGCC ACCGAACTGC TCGATTTCAC CGGCCGGCAC
CTGCGGGAAC GGCATCCGCA GCGCCGCCGG TTCGATGTCG GCAGTTGGGT CCGCGACAAC
CGCCGCGGCC GCACCGGAGC CGACGCCACG ATGCTGTTGG CCGCTGGCAC GCCCGGTTTC
GGCTTCGGCC ACGGTGAGGT CTGGTCGGTG CACACCGCCT GGAGCGGCAA TCACCGCACG
ATCGCCGAGC GCAGTCCGAA CGGACACGCC GTGCTGTCCG GCGGGGAACT GTTGCTGCCT
GGCGAGATCA CCCTGGGGCC GAGCGAGTCG TACACCACGC CATGGATCTA CGGTTCCTAC
GGCGGTGCCG GCCTGAACGC CGTGGCCGAC CGCTTCCACG CCTTCCTGCG GGGGCGGCCG
CAGCATCCCC GCAGCCCGCG TCCGGTCATC CTGAACACCT GGGAATCGGT GTACTTCGAC
ATGGACTTGC CGACGCTGAT CGCGCTGGCC GAGGCCGGCG CCGAGGTGGG TGTCGAACGG
TACGTGCTGG ACGATGGCTG GTTCACCGGC CGCCGCGACG ACACCGCCGG GCTGGGCGAC
TGGCAGGTCG ACCGCGACGT CTGGCCCAAT GGCCTCAAGC CCTTGGTGGA TCGGGTCACC
AAGCTCGGCA TGCAGTTCGG CATCTGGATT GAACCCGAGA TGATCAATCC CGACTCCAAT
CTCGCCCGCG CGCACCCGGA ATGGATGCTG TCCACCGGGC ACCGGCTGCC CATCGAATCA
CGGCACCAGC AGGTGCTGGA TCTGGCCAAT CCGGGCGCGT TCGACTACAT CCTGGGCAGC
CTGGACGACC TGCTCAAGAA GCACGACATC AGTTACCTCA AGTGGGACCA CAACCGGGAT
CTGATCGACG CCGGGCACAG TCCGGACGGT CAGCCGGCCG TGCACGACCA GACCCTGGCC
GTGTACCGGC TGATTGACGA ACTGCGCCGC CGCCACCCCG GGGTCGAGAT CGAGTCATGC
TCCTCCGGCG GCGCCCGAGT CGATCTGGAG GTGCTGCAGC GCACCGATCG GGTTTGGACC
AGCGACTGCA TCGACGCCCT GGAACGGCAG ACGATCCAGC GCTACACCGG GCTGCTGGTG
CCGCCGGAGA TGCTCGGCGC CCACATCGGC ACCGGCCAGG CGCACACCAC CGGACGCCGG
CACAACCTGT CCTTCCGGGC CGGCACCGCC CTGTTCGGCC ACATGGGAAT CGAGGCCAAC
CTGACCAGCA TGTCGGCCGC CGAGCGAGCT GAACTGGGCG AATGGGTTGC CCTGCACAAG
AAGCTGCGGC CGCTCCTGCA CACCGGCCGG GTGGTCCGTT TCGACGACGT CGACCCCTCG
CTGATGGTGC AGGGTGTCTA CGCGGCCGAC CTTTCCCAAG CCGTGATCAG CATCGCCGCG
ATCGCGACCG CCGACAGCGC CCCGATCGGC CGGCTCGTCA TTCCCGGCCT GGATCCGGAC
GCGCCCTATC ACCTGGAGCT GCTGCCGCCC GGCGATGTCA TCCAGGGCGA GGACGCCGAG
CGCCGCAACG GCAACAACAA GCACCTGCCA CCGTGGCTCG TCACCGGGAC CGACCTGACC
GGCGCGGCGC TGACCTACGC CGGGGTGCAG CTGCCCGATC TGCTTCCCGA GCAGCTGCTG
CTGCTGCGCG TCACCCGGGT ATGA
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| Protein sequence | MTSPATTSTV NEAARPADLG LNHPGSAVRH LRAAGVSVVI DCRGPRLPRI VHWGADLGDL
DRTTLDNLVR ADVQAVVSNV PDQPISPGLL AEHSTGWLGL PGLLGHRAGH QWSTLFDVTT
VSSSNDRDGT RRVVVDAADP DAGLRLVLTL ELLPAGVLRT RATLTSIADQ AGAPYTVDGL
ALSLPVPTRA TELLDFTGRH LRERHPQRRR FDVGSWVRDN RRGRTGADAT MLLAAGTPGF
GFGHGEVWSV HTAWSGNHRT IAERSPNGHA VLSGGELLLP GEITLGPSES YTTPWIYGSY
GGAGLNAVAD RFHAFLRGRP QHPRSPRPVI LNTWESVYFD MDLPTLIALA EAGAEVGVER
YVLDDGWFTG RRDDTAGLGD WQVDRDVWPN GLKPLVDRVT KLGMQFGIWI EPEMINPDSN
LARAHPEWML STGHRLPIES RHQQVLDLAN PGAFDYILGS LDDLLKKHDI SYLKWDHNRD
LIDAGHSPDG QPAVHDQTLA VYRLIDELRR RHPGVEIESC SSGGARVDLE VLQRTDRVWT
SDCIDALERQ TIQRYTGLLV PPEMLGAHIG TGQAHTTGRR HNLSFRAGTA LFGHMGIEAN
LTSMSAAERA ELGEWVALHK KLRPLLHTGR VVRFDDVDPS LMVQGVYAAD LSQAVISIAA
IATADSAPIG RLVIPGLDPD APYHLELLPP GDVIQGEDAE RRNGNNKHLP PWLVTGTDLT
GAALTYAGVQ LPDLLPEQLL LLRVTRV
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