| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_1699 |
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| Symbol | |
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| ID | 8447300 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | + |
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| Start bp | 1864133 |
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| End bp | 1864849 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 645040824 |
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| Product | Rhomboid family protein |
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| Protein accession | YP_003201078 |
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| Protein GI | 258651922 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.0109717 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.288911 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACGC CGTCGCAGTT CGGCTCGTCC GATTACGGCT CGTACACGCC GCCCGGGTAC
GGCCTCACGC CGTCCGGATC CGCGGCCCCG GCCAAGAAGT CGGTGCTGCC GGAGAACCTG
AAGACCGCCA TCATCGTCGT CGGCTCGCTG GCCGCGGTGA TGGTGATCGT GCAGGTCGTG
AACTGGGCGA TGGACTACCG CCTCGACCAG TTCGGCATCG AGCCGCGTAC CTGGTCGGGC
CTGTGGGGGG TGCTGGCCGC CCCGTTCATC CACGGCTCCT GGGCCCACCT GTGGTCCAAC
CTGATCCCGC TGGTGGTCAT GGGCGTGCTG ATCACCGTCG GCGGCCTGCG CCAGTTCTTC
GCGGTCACCG TGCTGGTCTG GCTGGTCTCC GGGCTCGGGG TCTGGCTGGT CGCGCCGTCG
GCCAGCGTCA CCGTCGGCGC CTCCGGTGTG GTCTTCGGCT GGCTGACCTT CCTGATCGTG
CGCGGCATCT GGACCCGCAC CTGGCAGCAC ATCCTGCTCG GCCTGGTGCT GCTGGTGCTC
TACGGCAGCC TGTTCTGGAC CGGCATCGTG CGGGTGGCGG CGTCGGATGT CACAGCCATC
ACCTCCATCC AGACCGTGTC CTGGCAGGCT CATCTGTTCG GCGCGCTCGG TGGCCTGCTG
GCCGCCTTCC TGGTCGGCCG GGCCGACGCG GGCCGCCGCC GCGCGGTCAC CGCCTGA
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| Protein sequence | MSTPSQFGSS DYGSYTPPGY GLTPSGSAAP AKKSVLPENL KTAIIVVGSL AAVMVIVQVV
NWAMDYRLDQ FGIEPRTWSG LWGVLAAPFI HGSWAHLWSN LIPLVVMGVL ITVGGLRQFF
AVTVLVWLVS GLGVWLVAPS ASVTVGASGV VFGWLTFLIV RGIWTRTWQH ILLGLVLLVL
YGSLFWTGIV RVAASDVTAI TSIQTVSWQA HLFGALGGLL AAFLVGRADA GRRRAVTA
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