Gene Namu_1657 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_1657 
Symbol 
ID8447256 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp1823033 
End bp1824331 
Gene Length1299 bp 
Protein Length432 aa 
Translation table11 
GC content70% 
IMG OID645040780 
ProductNa+/H+ antiporter NhaA 
Protein accessionYP_003201036 
Protein GI258651880 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3004] Na+/H+ antiporter 
TIGRFAM ID[TIGR00773] Na+/H+ antiporter NhaA 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.017914 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGTCAT CCGACGACAC CTCGTTGTTC TCACCCGGCT CCTGGTCGGA GAACAGCCGG 
CTCGCGCAAG TCCTGCGCCG CGAAACGGTC GGCGGTGCGC TGCTGCTGGC GGCCGCCGTC
ATCGCGCTGG TCTGGGCCAA TTCGCCCTGG TCCGCGGGCT ACTACGCGAT GCTGGACTTC
GTCGCCGGGC CGGAGCTGCT GCACCTGAAC CTGTCCCTGG AAACCTGGGC GGCGGACGGT
CTGCTGGCCA TCTTCTTCTT CGTCGCCGGG CTGGAGCTCA AACGCGAGTT CGTGGCCGGC
GACCTGCGGG ACCGGCGTCG CGCGGCCGTG CCGGTGTTCG CCGCGGTCGG CGGCATGGTC
GTGCCGGCCA TCGTCTACCT GGCCTTCGCG GCCGGCAGCG GACCTAAGGG TTGGGCGATC
CCGACCGCCA CCGACATCGC CTTCGCCCTG GCCGTGCTGG CGGTGATCTC GACCCACCTG
CCGTCGACCC TGCGCACCTT CCTGCTCACC CTGGCCGTGG TCGACGACCT GCTGGCGATC
ATTGTGATCG CCGTCTTCTA CACCGACGAG CTCAACCTGC TCTACTTCGG GCTGGCGTTG
ATCCCGCTGG CCGGGTTCGG GTTGCTGGTG CAGCGCCGGA TCAGCCATTG GTACCTGCTG
CTGCCGCTGG CCGTGGCCAC CTGGACGCTG GTGCACGCCT CCGGCATCCA CGCCACGGTG
GCCGGCGTGC TGCTCGCCTT CACCGTGCCG GTGCGGCCCG GCCGGGCGGC CAAGGACCCG
GACGGACCGG GGCTGGCCGA GCACTTCGAG CACCTGATGC GGCCGATCTC GGCCGGGATC
GCGGTGCCGC TGTTCGCGTT GTTCTCGGCC GGGGTGAGTT TGGGTGGCTG GTCCGGCTTC
ACCTCGGCGC TGACCGACCC GATCGCCCTG GGCATCATCG CCGGCCTGGT GGTCGGCAAG
CCGATCGGCA TCGTCTCCGC CACCTTCCTG ACCAGCAAGA TCACCCGCAC CCCGCTGCAG
GCGGGGTTGA CCTGGCCGGA CGTGACCGGC GTGGCCATCC TGGGCGGCAT CGGGTTCACC
GTGTCCCTGC TGATCGGCGA GCTGGCATTC GCGGCCAATC CGGAGGCCGA CGACCACGTC
AAGATCGCGG TGCTCACCGG GTCGCTGGTG GCCGCGGTGC TGGCCGCGGT GGTGCTGCGG
TTGCGCAACC GCCGCTACCG GCGGCTGTGG GAGGAGGAGA ACCGGGACGA CGACCAGGAC
GGGATCCCGG ACATCTATCA GCACCGAGAG CGCGAGTAG
 
Protein sequence
MPSSDDTSLF SPGSWSENSR LAQVLRRETV GGALLLAAAV IALVWANSPW SAGYYAMLDF 
VAGPELLHLN LSLETWAADG LLAIFFFVAG LELKREFVAG DLRDRRRAAV PVFAAVGGMV
VPAIVYLAFA AGSGPKGWAI PTATDIAFAL AVLAVISTHL PSTLRTFLLT LAVVDDLLAI
IVIAVFYTDE LNLLYFGLAL IPLAGFGLLV QRRISHWYLL LPLAVATWTL VHASGIHATV
AGVLLAFTVP VRPGRAAKDP DGPGLAEHFE HLMRPISAGI AVPLFALFSA GVSLGGWSGF
TSALTDPIAL GIIAGLVVGK PIGIVSATFL TSKITRTPLQ AGLTWPDVTG VAILGGIGFT
VSLLIGELAF AANPEADDHV KIAVLTGSLV AAVLAAVVLR LRNRRYRRLW EEENRDDDQD
GIPDIYQHRE RE