Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_1542 |
Symbol | |
ID | 8447140 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | - |
Start bp | 1702702 |
End bp | 1703691 |
Gene Length | 990 bp |
Protein Length | 329 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 645040669 |
Product | Porphobilinogen synthase |
Protein accession | YP_003200926 |
Protein GI | 258651770 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0113] Delta-aminolevulinic acid dehydratase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.347928 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.882388 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTATCCGA CCGTCCGTCC CCGGCGACTG CGGCGCACCG CGCCCATCCG CCGGCTCGTG CGCGAGACCC GGCTGCACCC GGCCGATCTC GTGCTGCCGG TGTTCCTCAA GCAGTCGCTG ACCGAGCCCG CCCCGCTGAC CTCGATGCCC GGGGTGCTCC AGCACACCCG GGATTCGCTG CGCCGGGCGG CCGCCGAGGC GGTGGCCGCC GGGGTGGGCG GTTTGATGGT GTTCGGGGTG CCCTCGGTCC GCGACGCCGT CGGCTCCCAG GCCACCGACC CGGCCGGCAT TCTCAACCTG GCCATGGCCG ACCTGCGAGC CGAGGTGGGC CCGGACACGG TGCTGATGGC CGACCTGTGC CTGGACGAGT TCACCGACCA CGGGCACTGC GGGGTGCTCA CCGCCGACGG CGCGGTCGAC AACGACGCCA CCCTGCTGCG CTACCGGGAG ATGGCCGTGG CCCTGGCCGA GGCCGGCAGC GACATGGTCG GCACCTCCGG GATGATGGAC GGCCAGGTCG GCGCGGTCCG CGACGCCCTG GACACCACCG GCCACACCGA CACCGCGGTC TTCGCCTACG GGGCCAAGTA CGCCTCGGCG TTCTACGGCC CGTTCCGGGA GGCCGTCGAC TCGGCCCTGC AGGGCGACCG GCGCACCTAC CAGCAGGATC CGGCCAACCG GCGGGAGGCC GCCCGGGAGG TGGCGCTGGA CGTTGCCGAG GGCGCCGACC TGATCATGGT CAAGCCGGCC ATGGCCTACC TGGACGTGCT CTCAGACGTG GCCGCCGCGA CCACGGTTCC GGTGGCTGCG TATCAGGTCT CGGGCGAGTA CGCGATGATC GAGGCGGCCG CGGCGAACGG GTGGATCGAC CGGAACCGGG CGATCGCCGA GACGTTGACC GGCATCCGGC GGGCCGGCGC GCAGATCGTG CTGACCTACT GGGCGGCCGA GGTGGCGGCG GAACTGTCCG CCGGGAGGGA TTTCTCGTGA
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Protein sequence | MYPTVRPRRL RRTAPIRRLV RETRLHPADL VLPVFLKQSL TEPAPLTSMP GVLQHTRDSL RRAAAEAVAA GVGGLMVFGV PSVRDAVGSQ ATDPAGILNL AMADLRAEVG PDTVLMADLC LDEFTDHGHC GVLTADGAVD NDATLLRYRE MAVALAEAGS DMVGTSGMMD GQVGAVRDAL DTTGHTDTAV FAYGAKYASA FYGPFREAVD SALQGDRRTY QQDPANRREA AREVALDVAE GADLIMVKPA MAYLDVLSDV AAATTVPVAA YQVSGEYAMI EAAAANGWID RNRAIAETLT GIRRAGAQIV LTYWAAEVAA ELSAGRDFS
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