Gene Namu_1457 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_1457 
Symbol 
ID8447053 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand+ 
Start bp1609253 
End bp1609876 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content64% 
IMG OID645040586 
Producttransposase IS116/IS110/IS902 family protein 
Protein accessionYP_003200845 
Protein GI258651689 
COG category[L] Replication, recombination and repair 
COG ID[COG3547] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.313121 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCATGA CCGGCCGGTT CACCGGCCAC CACGCGTTCA TGCTCAAACT GCATCTACAG 
GTCATCGATC AGTTGACCGC GGCGATCGAG GAACTGAGCA GCCAGATCGA GGTGGTGATC 
GAACCCTTTC GCGGCCAGCT CCGACTCCTG ATCACCATCC CCGGGGTCAG CGAACAGATC 
GCGGTCGTCA TCATCGCCGA GACCGGTGCG GACATGAGCA AGTTCCCCAC CGCCGGACAC 
CTGGCGTCCT GGGCCGGCAT CTGTCCGGGC CACCATCAAT CCGCCCAGGT CAACCAGAAA 
GCCAGGACCA GACCCGGGAA CTCCTACCTC AAAGGCGCGC TGGGCCAGGC CGCCATGTCC 
AGCATGCAAG TCCACGACAC GTTCCTGCAG GACCGTCATC ACCGCCTCAA ACCACGCATC 
GGTGGACTGA AGACCATCGT CGCGCTCGAG CACAGCATCC TGCGCTCGAT CTGGCACATG 
CTGGTCAGCA ACCAGCCCTA CCGCGAACTC GGCGCCGGAT ACCACCAGCG ACGCCACCCC 
CAGAACGTCC TTCGCCGGAT CACCCGCCAA GCCCAAGAAC TGGGCTACGC CGCCCACTTC 
GAACCCCTCC CGAAGACCGC CTGA
 
Protein sequence
MAMTGRFTGH HAFMLKLHLQ VIDQLTAAIE ELSSQIEVVI EPFRGQLRLL ITIPGVSEQI 
AVVIIAETGA DMSKFPTAGH LASWAGICPG HHQSAQVNQK ARTRPGNSYL KGALGQAAMS 
SMQVHDTFLQ DRHHRLKPRI GGLKTIVALE HSILRSIWHM LVSNQPYREL GAGYHQRRHP 
QNVLRRITRQ AQELGYAAHF EPLPKTA