Gene Namu_1444 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_1444 
SymbolmnmA 
ID8447040 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp1597854 
End bp1598960 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content72% 
IMG OID645040575 
ProducttRNA-specific 2-thiouridylase MnmA 
Protein accessionYP_003200834 
Protein GI258651678 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain 
TIGRFAM ID[TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.519557 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.73161 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGGTGC TGGCCGCGAT GAGCGGCGGG GTCGACTCGG CGGTGGCCGC CGCGCTGGCG 
GTGGAGGCCG GACACGAGGT GACCGGCGTG CACATGGCGC TGTCCCGCAC GCCCGGCACG
CTGCGCACCG GATCGCGGGG CTGCTGCACG GTGGAGGACG CGTTCGACGC CCGACGGGTC
TGCGACCTGC TCGGCATCCC TTTCTACGTC TGGGATTTCA GCGAGGACTT CCTGGACGAC
GTGGTCGCCG ATTTTCTGTC CGAGTACGCC GCCGGGCGCA CCCCCAACCC GTGCCTGCGG
TGCAACGAGA AGATCAAGTT CGCGGCCCTG CTGGACCGCG CGATCGCCCT CGGGTTCGAC
GCCGTCTGCA CCGGGCACTA CGCGCGGCTG ATCGACGGCG CGCTGTACCG CAGCGTCGAC
CTGGCCAAGG ACCAGTCCTA CGTGCTGGCC GTGCTCACTC CGGATCAGTT GGCGCACAGC
ATGTTCCCGC TGGGCGAGCT GACCAAGCCT CAGGTCCGGG CGCAGGCCCA GGCGCGCGGG
TTCGCGGTGG CCGCCAAGCC GGATTCCTAC GACATCTGCT TCATCCCGGA CGGCGACACC
CACGGGTACC TGGTGGACAA GCTGGGGGCC CGGCCGGGGG CGGTCGTCGA CGCCACGACG
GGTGAGCAGA TCGCCGAGCA CGACGGCTTT TTCGCCTACA CCATCGGTCA GCGCAAGGGT
CTGGGCCTTT CCCGACCCGC GGCCGACGGC CGACCCCGCT ACGTGCTGGG GATCGAGCCG
ACGACGCGCA CGGTGACGGT CGGTCCGGCC AGCGGGTTGG ACGTCCGGCT GGTGGTCGCC
GATCGGGTGG TCTTCCCCGG TGGCCGCCGT CCCGACTTCC CGATCCGGGT GCAGGCTCAG
CTGCGGGCGC ACGGCGGCAC GGTGGGCGGC TCGGCTGATC TGGTGGACGG AACGCTGCGG
CTGAGCCTGG ATCAGGCGGC GCGCGGGGTG GCCCCGGGTC AGACCATGGT GCTCTACGGC
GGGGCGACGC CGGACGCGGC CAGCGCCGGC CCGGCCGCCG ATCAGTATGT GCTCGCGGCC
GGCACGATCG TGCGGACCGG CGGATGA
 
Protein sequence
MRVLAAMSGG VDSAVAAALA VEAGHEVTGV HMALSRTPGT LRTGSRGCCT VEDAFDARRV 
CDLLGIPFYV WDFSEDFLDD VVADFLSEYA AGRTPNPCLR CNEKIKFAAL LDRAIALGFD
AVCTGHYARL IDGALYRSVD LAKDQSYVLA VLTPDQLAHS MFPLGELTKP QVRAQAQARG
FAVAAKPDSY DICFIPDGDT HGYLVDKLGA RPGAVVDATT GEQIAEHDGF FAYTIGQRKG
LGLSRPAADG RPRYVLGIEP TTRTVTVGPA SGLDVRLVVA DRVVFPGGRR PDFPIRVQAQ
LRAHGGTVGG SADLVDGTLR LSLDQAARGV APGQTMVLYG GATPDAASAG PAADQYVLAA
GTIVRTGG