Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_1428 |
Symbol | kgd |
ID | 8447024 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | - |
Start bp | 1576528 |
End bp | 1580469 |
Gene Length | 3942 bp |
Protein Length | 1313 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 645040559 |
Product | alpha-ketoglutarate decarboxylase |
Protein accession | YP_003200818 |
Protein GI | 258651662 |
COG category | [C] Energy production and conversion |
COG ID | [COG0567] 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes |
TIGRFAM ID | [TIGR00239] 2-oxoglutarate dehydrogenase, E1 component |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.44598 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.8951 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCGTCAG CAGCGCCAGA ATTCGGCCCC AACGACTGGT TTGTCGAGGA GAAGTACCAG CAGTTCCTCG CAGACCCCCA GAGCGTGGAC CCGATCTGGC GTGATTTCTT CGCCGACGCC AAGGCGCCGA GCACGCTGAT CGGTGTCTCC GCCACCAACG GCACCGCCGG CGTGGCCAAC GCCACAACCG CCAATGCCAC AACCGCCAAT GCGACAGCGG GCACGGCGAC GGCCACCGCG ACCGCGGCGC CCGCCAAGCC CGCGGCGCCG CCCAAGGCGG CCGCTGCCCA GGCGGCCCCG AAGAGCGCGG GCGGCTCGGC GAACGGCGCG ACCGCCGGCG CGACTCCGCC GCCCCCGCCC CCGCCGAACC GCAGCGGGAA GGCCGCCGCG AGCCCGGCGG CGAATTCCGC CCCGGCCACC AGCCAGGTGG TGACCACCCC GGCCAGCAAG AGCGCCCCGG CCGGCGGCAA GGAGAGCGTG GACGCCGCCC CGACGGCCCC GACCCGCCGC CCGGCGACCA CTGCGACGCC CGACGACATG GTCGCGGCCC GCGCGGCCAA GGCGGCCCGG GCGGCGCACG ACGCCGAGGG TGACGGCCTG ACCACCACCC CGCTGCGGGG TGTGGCCGCG GTCGTGGTCA AGAACATGAC GACCTCGCTG GAGGTGCCGA CCGCCACCTC GGTGCGGGCC GTGCCGGCCA AGCTGATGGC CGACAACCGG ATCGTCATCA ACAACTTCCT CAAGCGCAAC CGCGGCGGCA AGATCTCCTT CACCCATCTG ATCGGGTACG CGATCGTTCG CGCGATCAGC GACTACCCGA ACATGAACCG GCACTTCGCC GAGGTGAACG GCAAGCCGTC GATGGTGACG CCGAGCCACG TCAACCTAGG CCTGGCCATC GACCTGCCGG CCAAGGGCGG CGGGCGCAAC CTGGTCGTGG TGCCGATCCG CAGCGCCGAG ACGATGAGCT TCACTCAGTT CTGGAGCGCC TACGAGCAGG TCGTCCGCAA GGCCCGGCAG GGCCAGCTCA CCGCGGAGGA CTACCAGGGC ACCACCATCT CGCTGACCAA CCCCGGCGGC ATCGGCACCA ACCACTCGGT GCCCCGATTG ATGCAGGGCC AGTCCGCGAT CATCGGCGTC GGCGCGCTGG AGTACCCAGC CGCCTTCCAG GGCGCGGCCG ACCAGATGCT GGCCGACCTG GGCGTGTCCA AGATCATCAC GCTGACCTCG ACCTACGACC ACCGGGTGAT CCAGGGCGCC GAGTCCGGCG AATTCCTGCG TCGCATCCAC CAGCTGCTGA TCGGCGAGGA TCAGTTCTAC GACGACGTCT TCGCCTCGCT GCGGCTGCCC TACGAACCGG TGCGCTGGGT CAAGGACCTG GACGCCGGCC GGCACGGCCA GATCGACAAG ACCGCCCGGG TCCTGGAGAT CATCGACGCC TACCGCACCC GCGGCCACCT GATGGCCGAC ACCGATCCGC TGAACTACCG GCAGCGCCGT CACCCCGACC TGGACGTGCT CTCGCACGGG CTGACGCTGT GGGACCTGGA CCGCGAATTC GCCGTCGGCG GGTTCAACGA CCGCGACTTC ATGAAGCTGC GTGACGTGCT GGGGGTGCTG CGCAACTCCT ACTGCCGCAC CGTGGGCATC GAATACATGC ACATCATGGA CCCGGTGCAG CGCCGCTGGA TCCAGCAGCG GGTCGAGGTG ATGCACGAAA AGCCCCCGGT CGAGGAGCAG AAGTACATCC TGGGCCGGCT GAACAGCGCC GAGGCGTTCG AAACCTTCCT GCAGACCAAG TACATCGGCC AGAAGCGGTT CTCCCTCGAG GGCGGCGAGA CCGTCATCGC GCTGCTGGAC GCCGCGCTGA ACAAGTCGGC CGAGTACGGC ATGGACGAGG TCGTCATCGG CATGGCCCAC CGCGGCCGGC TCAACGTGCT GGCCAACATC GTGGGCAAGC CCTACTCGCA GATCTTCCGC GAGTTCGAGG GCAACATGGA CCCCGGTCAG GCGCACGGCT CCGGTGACGT GAAGTACCAC CTGGGCGCGG AGGGCAAGTA CATCCGTCCG TTCGGCGAGG GCCAGGTCGA CGTGACCCTG TGTGCCAACC CCTCACACCT GGAGGTCGTC GACCCGGTGC TGGAGGGTGT GGCCCGGGCC AAGCAGGACA TGCTCAACCT CGGCGAAGAG GGCTACAGCG TGATGCCGAT CGCCATCCAC GGCGACGCCG CGTTCGCCGG CCAGGGTGTG GTGGCCGAGA CGCTGAACCT CTCGCTGCTG CGCGGGTACC GCACCGGCGG CACCATGCAC GTGATCATCA ACAACCAGGT CGGCTTCACC ACCGCCCCGG AGTCCTCCCG GTCCAGCGAG TACTGCACCG ACGTGGCCAA GATGATCCAG GCGCCGATCT TCCACGTGAA CGGCGACGAC CCGGAGGCCG CCGTCTGGGT GGCCCGGCTC GCCGTGGAAT ACCGGCAGAC CTTCGGCCGG GACGTCGTCA TCGACATGGT CTGCTACCGC CGCCGCGGTC ACAACGAGGG CGACGACCCG TCGATGACCA ACCCGCTGAT GTACCAGATC ATCGACGGCA AGCGGTCGGT GCGCCGGATC TACACCGAGG CGCTGATCGG CCGCGGCGAC ATCACCCCCG AGGACGCCGA AGAGGCCCTG CGCGATTACC ACACCCAGCT GGAGCGGGTG TTCAACGAGG TCCGCGAACT GGAGCGGGCC GTCGTCGCGC CGTCGCCGTC GGTGGAGGCC GAGCAGCCGA TCCCGCCGCG GGTGGAGACC AAGATCAGCC AGCAGGTGAT GGAGCGCATC GCCGACGTGG CCCTGGACTA CCCCGAGGGC TTCACCCCGC ACCCGCGGGT CAAGCAGGTG CTGCAGCGCC GGGCCGAGAT GGCCCGCGAG GGCGGCATCG ACTGGGCCTT CGGCGAGCTG CTGGCCCTCG GCTCGATCGC GATGGAGGGC CGGCTGGTCC GGATGTCCGG CCAGGACACC CGCCGCGGCA CCTTCGTGCA GCGGCACTCG GCGTTGATCG ACAAGAGCAC CGGGGCCGAG TACCTGCCGC TGCAGCATCT GTCCGACGAA CAGGGCCGGG TGCTCATCTA CGACTCGGCC CTGTCCGAGT ACGCCGCCCT CGGGTTCGAG TACGGCTACT CGGTGGCCAA CCGGGACGCG CTGGTGCTGT GGGAGGCGCA GTTCGGCGAC TTCGTCAACG GCGCCCAGTC GGTCATCGAC GAGTACATGT CCTCCGGCGA GGCCAAGTGG GGCCAGCAGT CCGGCGTCGT GCTGCTGCTG CCGCACGCGC ACGAGGGCCA GGGCCCGGAC CACACCTCCG GCCGGATCGA GCGTTTCCTG CAGCTGTGTG CGGAAGGCTC GATGACGATC GCGGTGCCCT CCACCCCGGC CAACTACTTC CACCTGCTGC GCCGGCACGT GCTGGACGGC GTGCACCGGC CGATGGTCGT GTTCACCCCC AAGTCGATGC TGCGCAACAA GGCCGCGGTC TCGGAGGTCA AGGACTTCAC CCACGGCAAG TTCGAGTCGG TCATCGCGGA CTCCTCGATC GCCCCGCTGC ACGTGAAGAA GGTGCTGCTG ACCAGCGGCA AGCTGTACTA CGAGCTGGAC GCCTACCGCC GCAAGCACGA CATCACCGAC ACCGCGATCG TGCGGCTGGA GCAGATCTAC CCGGTGCCAC GGCGCAAGCT GCTGCACGTG CTGGAGTCCT ACCCGAACGT GATGGACTTC CGCTGGGTGC AGGAGGAGCC GGCCAATCAG GGGGCGTGGA CGTTCCTGGC GCTGTCCCTG CCGGAGATGC TGCCCCGCTT GACCGGCCTG CAGCGGGTGT CCCGCCGGGC GATGGCCGCC CCGTCGGCCG GGTCGGCCAA GGTGCACGAG GTCGAGCAGC AGGCGGTGAT CGCGGCCGCG TTCGCGCGGT AG
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Protein sequence | MSSAAPEFGP NDWFVEEKYQ QFLADPQSVD PIWRDFFADA KAPSTLIGVS ATNGTAGVAN ATTANATTAN ATAGTATATA TAAPAKPAAP PKAAAAQAAP KSAGGSANGA TAGATPPPPP PPNRSGKAAA SPAANSAPAT SQVVTTPASK SAPAGGKESV DAAPTAPTRR PATTATPDDM VAARAAKAAR AAHDAEGDGL TTTPLRGVAA VVVKNMTTSL EVPTATSVRA VPAKLMADNR IVINNFLKRN RGGKISFTHL IGYAIVRAIS DYPNMNRHFA EVNGKPSMVT PSHVNLGLAI DLPAKGGGRN LVVVPIRSAE TMSFTQFWSA YEQVVRKARQ GQLTAEDYQG TTISLTNPGG IGTNHSVPRL MQGQSAIIGV GALEYPAAFQ GAADQMLADL GVSKIITLTS TYDHRVIQGA ESGEFLRRIH QLLIGEDQFY DDVFASLRLP YEPVRWVKDL DAGRHGQIDK TARVLEIIDA YRTRGHLMAD TDPLNYRQRR HPDLDVLSHG LTLWDLDREF AVGGFNDRDF MKLRDVLGVL RNSYCRTVGI EYMHIMDPVQ RRWIQQRVEV MHEKPPVEEQ KYILGRLNSA EAFETFLQTK YIGQKRFSLE GGETVIALLD AALNKSAEYG MDEVVIGMAH RGRLNVLANI VGKPYSQIFR EFEGNMDPGQ AHGSGDVKYH LGAEGKYIRP FGEGQVDVTL CANPSHLEVV DPVLEGVARA KQDMLNLGEE GYSVMPIAIH GDAAFAGQGV VAETLNLSLL RGYRTGGTMH VIINNQVGFT TAPESSRSSE YCTDVAKMIQ APIFHVNGDD PEAAVWVARL AVEYRQTFGR DVVIDMVCYR RRGHNEGDDP SMTNPLMYQI IDGKRSVRRI YTEALIGRGD ITPEDAEEAL RDYHTQLERV FNEVRELERA VVAPSPSVEA EQPIPPRVET KISQQVMERI ADVALDYPEG FTPHPRVKQV LQRRAEMARE GGIDWAFGEL LALGSIAMEG RLVRMSGQDT RRGTFVQRHS ALIDKSTGAE YLPLQHLSDE QGRVLIYDSA LSEYAALGFE YGYSVANRDA LVLWEAQFGD FVNGAQSVID EYMSSGEAKW GQQSGVVLLL PHAHEGQGPD HTSGRIERFL QLCAEGSMTI AVPSTPANYF HLLRRHVLDG VHRPMVVFTP KSMLRNKAAV SEVKDFTHGK FESVIADSSI APLHVKKVLL TSGKLYYELD AYRRKHDITD TAIVRLEQIY PVPRRKLLHV LESYPNVMDF RWVQEEPANQ GAWTFLALSL PEMLPRLTGL QRVSRRAMAA PSAGSAKVHE VEQQAVIAAA FAR
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