| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_1406 |
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| Symbol | |
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| ID | 8447002 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | - |
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| Start bp | 1556163 |
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| End bp | 1557293 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 645040537 |
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| Product | glycine betaine/L-proline ABC transporter, ATPase subunit |
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| Protein accession | YP_003200796 |
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| Protein GI | 258651640 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1125] ABC-type proline/glycine betaine transport systems, ATPase components |
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| TIGRFAM ID | [TIGR01186] glycine betaine/L-proline transport ATP binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.515015 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATCAGCT TCGAATCGGT ATCCAAGATC TACCCGGACG GCACCCATGC CGTGGAGGAA
CTCTCCCTGG AGATCGCGAC CGGCCGCATC ACGGTATTCG TGGGCCCGTC CGGCTGCGGC
AAGACGACCT CGCTGCGCAT GATCAACCGG ATGATCGAGC CCACCCACGG CGTGCTGTCC
ATCGACGGGC GGGACATCTC CACCGTCGAC GCCCCGGTGT TGCGGCGCGG CATCGGGTAC
GTCATCCAGA ACGCCGGCCT GTTCCCGCAC CGCACAGTGC TGGACAACGT GGCCACCGTG
CCGGTCCTGC AGGGCCGCAG CCGCCGGGAG GCCCGGCTGG CGGCGGCCGA ACTGCTGGAC
CGGGTGGGCC TGGACCGCAA CCTGGCCAAG CGCTATCCGG CCCAGCTCTC CGGCGGGCAG
CAGCAGCGGG TCGGGGTGGC CCGGGCCCTG GCCGCCGATC CGCCGGTGAT GCTGATGGAC
GAGCCGTTCT CCGCGGTCGA CCCGGTGGTC CGCAACCAGC TGCAGGACGA GCTGATCCGG
TTGCAGGCCG ATCTCGGTAA GACCATCGTG TTCGTCACCC ATGACATCGA CGAGGCGGTC
AAGCTCGGCG ACCGGATCGC GGTCTTCGCG GTCGGCGGCC GGCTGGCCCA GTACGCCGAG
CCGGCCGAGG TGCTCAGCCG GCCGGCGGAC GATTTCGTCG CCGACTTCGT CGGCCGGGAC
CGCGGTTACC GCGCCCTGTC GTTCGTCACC GGCGACCTGC CGGTCCGGCC GGAGCAGACG
CTGACCTTGG GCGCCCCCGT GCCTCGCGGG GCCGGCAGCG CCGCCGAGGG CATCTCCGCC
GATCACGGGC GCTGGATCCT GGTGGTGGAC GACGACCGCC GGCCGCGCGG CTGGCTGGAC
TGCGCGGCGG TCCCGGTCGG GCATCCGGTC GGGGTCGACG ATCTCGTGCT GGGCGGCTCG
CTGGCCGCGC CGGACGGATC CCTGCGCCGG GCCCTGGACG CGGCGCTGTC CTCCCCGTCC
GGGCGCGGCG TGGCGGTCGA TGCCGACGGC GCCGTAGTCG GCACCATCAC CGCCGCCGAG
GTGCTGACCG CGATCGAGCA GTCCCGTGGT CCGGACAAGG TCACGACATG A
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| Protein sequence | MISFESVSKI YPDGTHAVEE LSLEIATGRI TVFVGPSGCG KTTSLRMINR MIEPTHGVLS
IDGRDISTVD APVLRRGIGY VIQNAGLFPH RTVLDNVATV PVLQGRSRRE ARLAAAELLD
RVGLDRNLAK RYPAQLSGGQ QQRVGVARAL AADPPVMLMD EPFSAVDPVV RNQLQDELIR
LQADLGKTIV FVTHDIDEAV KLGDRIAVFA VGGRLAQYAE PAEVLSRPAD DFVADFVGRD
RGYRALSFVT GDLPVRPEQT LTLGAPVPRG AGSAAEGISA DHGRWILVVD DDRRPRGWLD
CAAVPVGHPV GVDDLVLGGS LAAPDGSLRR ALDAALSSPS GRGVAVDADG AVVGTITAAE
VLTAIEQSRG PDKVTT
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