Gene Namu_1332 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_1332 
Symbol 
ID8446928 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp1466125 
End bp1467309 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content75% 
IMG OID645040465 
Productprotein of unknown function DUF58 
Protein accessionYP_003200724 
Protein GI258651568 
COG category[R] General function prediction only 
COG ID[COG1721] Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.0542564 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCCTGC GCCAGGCCCG CGGGATCATC ACCCCGCTGG GCTGGTCGGT GCTGGGCGCC 
GCCGTGGCGT TGTTCCTGCT GGCCTTCGGC GGCGGGTGGG TCGAATGCGC GATCGCCGGG
TCGGCATTGC TGGCCGCGTT GCTGGCGGCC CTGCTGTTCT CGATCGGGCG GGCCCGGTAC
CGGGTCGAGA TCGACCTGCG CACCCGGCGG GTCGTCGTCG GCGAGCCGGC GTCCGGCCGG
ATCGTGGTGA CCAGCACCGC CTCTCGGGCG CTGCTGCCGT CCCGAATGGA GCTGCCGGTC
GGTGACGGCG TGGGGCGCCT GGCCATCCCG GCCCTGCGCC CGGCCGAGCA GCACGAGGAC
CTGTTCGTGG TGCCCACCCA GCGTCGGGCC GTCATCGCGG TGGGACCGGC CCGCTCGGTC
CGTGGCGACG CGTTCGGCCT GGTCCGCCGG GAGGTGCGCT GGACCGACCC GCAGCTGCTG
TACGTGCACC CGCGGACGAC GTCGTTGTCC GGGGCGGTGG CCGGGTTCTT CAAGGACCTG
GAGGGCCAGC CCACCGACGA CCTGTCCAAC GACGACGTGT CCTTCCATGC GCTGCGCGGA
TACGTCCCCG GCGACGACCG CCGCTACATC CACTGGCGGA CCTCGGCCCG GTCCGGCGCG
CTGATGGTGC GCCAGTTCGA AGAGACCCGC CGCTCGCACA TCGCGGTGGC ACTGTCCACC
GACGCCGCCG AGTACGCCGA CCCGGACGAG TTCGAGCTGG CGGTGGAGGC CGGTGCATCC
GTCGTCGTGC AGGCGGCCAA GGAGAGCCGG GAGCTCACGG TCGTCGCCGG CGGCACCCCG
GTGCCGGCCG GCCCCGCGCG GCGCACCCTG GACCGGCTGG CCGGCGTCCA GATCGACGAC
CGGCCGGCTC GCACGGCCGA CCTGGAGGTC GGCATCGTGG CCACCGCCCG CCGGGTCGCC
GAGCTGACCC CGGACGTCTC CATCGTGTTC CTGCTCTGCG GATCCACCCC CACCCCGGCG
CAGATCCGGC AGGCCGGGGC GGCGCTGCCG GTGGGCGTGC GGGTGATCGC GGTCCGCGCG
GTCCCGGGCG TGGCGCCGTC GGTGCGCCGG ATCTCCGGTC TCACCGTCGT CACGGTCGGC
GCCCTGGACA AGCTGCCGGT CACCCTGCGC AAGGCCCGCG GATGA
 
Protein sequence
MTLRQARGII TPLGWSVLGA AVALFLLAFG GGWVECAIAG SALLAALLAA LLFSIGRARY 
RVEIDLRTRR VVVGEPASGR IVVTSTASRA LLPSRMELPV GDGVGRLAIP ALRPAEQHED
LFVVPTQRRA VIAVGPARSV RGDAFGLVRR EVRWTDPQLL YVHPRTTSLS GAVAGFFKDL
EGQPTDDLSN DDVSFHALRG YVPGDDRRYI HWRTSARSGA LMVRQFEETR RSHIAVALST
DAAEYADPDE FELAVEAGAS VVVQAAKESR ELTVVAGGTP VPAGPARRTL DRLAGVQIDD
RPARTADLEV GIVATARRVA ELTPDVSIVF LLCGSTPTPA QIRQAGAALP VGVRVIAVRA
VPGVAPSVRR ISGLTVVTVG ALDKLPVTLR KARG