Gene Namu_1256 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_1256 
Symbol 
ID8446852 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp1380111 
End bp1380488 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content69% 
IMG OID645040390 
Productchorismate mutase 
Protein accessionYP_003200649 
Protein GI258651493 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1605] Chorismate mutase 
TIGRFAM ID[TIGR01808] monofunctional chorismate mutase, high GC gram positive type 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.0645923 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.370124 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAGTG CCCTGACCGC CCCGCAGTCG ACCGAGAGCA AGCTTCCGGT GCATCTGCGG 
ACCAGATCGA CCATCACGGA GCCGGACATC GTCGCCAGCG AAACGCCCGA GGAAGTGCCC
GTCCCGGACA GTCAGGAGGG GATCGACGAG CTGCGCGTGG AGATCGACGA GATCGACGCC
AAGCTGGTCG AGCTGATCCT GCGGCGCACC GCCATCTCGC ACGCGATCGG CCGGGCCCGC
AAGAGCCTGG GCGGACCGAA GATCGTCTAC AGCCGGGAGA TGGCCGTGCT GGAGCGCTTC
CGCGCCCTCG GTCCGGCCGG CACCGACCTG GGCATGATGC TGCTGGCCAT GGGCCGAGGC
AAGCTCGGCC GCAAGTAG
 
Protein sequence
MTSALTAPQS TESKLPVHLR TRSTITEPDI VASETPEEVP VPDSQEGIDE LRVEIDEIDA 
KLVELILRRT AISHAIGRAR KSLGGPKIVY SREMAVLERF RALGPAGTDL GMMLLAMGRG
KLGRK