Gene Namu_1250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_1250 
Symbol 
ID8446846 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp1373283 
End bp1374854 
Gene Length1572 bp 
Protein Length523 aa 
Translation table11 
GC content73% 
IMG OID645040384 
ProductGMP synthase, large subunit 
Protein accessionYP_003200643 
Protein GI258651487 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0519] GMP synthase, PP-ATPase domain/subunit 
TIGRFAM ID[TIGR00884] GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit
[TIGR00888] GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.026459 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.348745 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCGACC AGCCCGCCGC CCATCCGAAC CCGGTGCTGG TGGTCGATTT CGGGGCGCAG 
TACGCGCAGC TGATCGCCCG CCGGGTCCGG GAGGCGAACA TCTACTCCGA GATCGTGCCC
TCCACCGCGA CCGTCGCCGA GATCGCGGCC CGCGAGCCGG CCGCGGTGAT CCTGTCCGGC
GGCCCGTCCA GCGTGTACGC CGACGGCGCG CCGGCCGTCG ATCCGGCTCT GTTCGACACC
GAGATCCCCG TCATGGGCAT CTGTTACGGC TTCCAGGCGA TGGCCCGGGC GCTGGGCGGC
ACCGTCGCCC GCACCGGCCG CCGCGAGTAC GGCGCCACCG ACCTGTCCGT CGGCGCTCCG
GACGCGACCC TGCTGCGGGA CCTGCCGGCC CGGGCGACCG TCTGGATGAG CCACGGCGAC
GCGGTGTCGG CCGCCCCCGA CGGGTTCACC GTCACCGCCA GTACCCCGGA CACCCCGATC
GCCGCGTTCG AGAACCTGGA CCGGCGGCTG GCCGGCGTCC AGTACCACCC CGAGGTGGCC
CACACCGAGC ACGGCCAGGA CGTCCTGCGG CGCTTCCTGT ACGACGTCGC CGGCATCATC
CCGGACTGGA ACCCGCAGAG CATCCTGGAC GAGCAGGTGG CCGCCGTCCG CGCGGTCGTC
GGCACCGAGA AGGTGATCTG CGCGCTGTCC GGCGGGGTCG ACTCCGCGGT CGCCGCGGCG
CTGGTGCACC AGGCCGTGGG CGACCAGCTG ACCTGCGTGT TCGTCGACCA CGGCCTGCTG
CGGGCCGGGG AGCGCGAGCA GGTCGAGCGC GACTACGTCG CGGCCACCGG CATCCACCTG
GTGACCGTGG ACGCCGAGCA GCGGTTCCTG GCCGCCCTGG ACGGCATCAC CGAGCCCGAG
ACCAAGCGCA AGATCATCGG CCGCGAGTTC ATCCGGGTCT TCGAAACCGC GGCCGCGGAG
ATCAACGCGG CCGAGGGCGG GGTGAAGTTC CTGGTCCAGG GCACCTTGTA CCCGGACGTG
GTGGAGTCCG GCGGCGGCAC CGGCACCGCG ACGATCAAGT CCCACCACAA CGTCGGCGGC
CTGCCCGACG ACCTGCAGTT CCAGCTGGTC GAGCCGCTGC GGGCGCTGTT CAAGGACGAG
GTCCGGGCCC TGGGCGCCGA ACTCGGCCTG CCCGCGGCGA TGGTCAAGCG GCACCCGTTC
CCCGGACCCG GCCTGGGCAT CCGGATCATC GGTGCGGTCG ACGCCGAACG GTTGGCGGTG
CTGCGGGCGG CCGACGCGAT CGTCCGCGAG GAGATGACCG CGGCCGGGGT GGACGAGCAG
ATCTGGCAGT GCCCCGTCGT GCTGCTGGCC GACGTGCGCT CGGTCGGGGT GCAGGGCGAC
GGCCGCACCT ACGGCCACCC GATCGTGCTG CGCCCGGTCT CCAGCGAGGA CGCGATGACG
GCCGACTGGT CCCGCCTGCC CTACGACCTG CTGGCCCGGA TCTCCAACCG GATCACCGGC
GAGGTCAGCG AGGTCAACCG GGTCGTGCTG GACATCACCA GCAAGCCGCC GGGCACCATC
GAGTGGGAGT GA
 
Protein sequence
MPDQPAAHPN PVLVVDFGAQ YAQLIARRVR EANIYSEIVP STATVAEIAA REPAAVILSG 
GPSSVYADGA PAVDPALFDT EIPVMGICYG FQAMARALGG TVARTGRREY GATDLSVGAP
DATLLRDLPA RATVWMSHGD AVSAAPDGFT VTASTPDTPI AAFENLDRRL AGVQYHPEVA
HTEHGQDVLR RFLYDVAGII PDWNPQSILD EQVAAVRAVV GTEKVICALS GGVDSAVAAA
LVHQAVGDQL TCVFVDHGLL RAGEREQVER DYVAATGIHL VTVDAEQRFL AALDGITEPE
TKRKIIGREF IRVFETAAAE INAAEGGVKF LVQGTLYPDV VESGGGTGTA TIKSHHNVGG
LPDDLQFQLV EPLRALFKDE VRALGAELGL PAAMVKRHPF PGPGLGIRII GAVDAERLAV
LRAADAIVRE EMTAAGVDEQ IWQCPVVLLA DVRSVGVQGD GRTYGHPIVL RPVSSEDAMT
ADWSRLPYDL LARISNRITG EVSEVNRVVL DITSKPPGTI EWE