Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_1246 |
Symbol | |
ID | 8446842 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | + |
Start bp | 1368280 |
End bp | 1370439 |
Gene Length | 2160 bp |
Protein Length | 719 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 645040380 |
Product | hypothetical protein |
Protein accession | YP_003200639 |
Protein GI | 258651483 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.534306 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.385301 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCCCAGC TCGATAGCAC GAGCTTCGTC AACCCGTATA CCTTCGTGGC GATCTCCGAT GTGATCCCGA GGCGCCGGCC GCCGGGGCAC GACGGTGGCA ACCGGCTGGG GCCTAATGGG CAGCCGCTTT ACTCCGGTTC GCTCGACGTC ACCTGGACTC TGGCGACACC CATGCTCCTG CCTGCCGGCG AGATCAGCTG CAATGTGGAC GGCGCCGTGC AGGTTCCCGG GGCGTCGGTC AAGGGGGCCG TCCGTTCGCT GCACGAAGCC ATGTTCCGGG GCTGCCTGCG GGTGGTCGAC GAGGGCTTTC TTCCGTCATA TCGGCAGATC GCCGGGTCCA AGCCGCAGCC ACCGTGGCGG CTGGGCGTGG TGCAGCGGTC CACGGCGGCT GGAAAGCCGA TCGCGATCAA GCTGTGTGAG GAGACGGTCT GGGTAGACGG CCCGAGCCTG TTGGCTGCCT ACGGTCGTCA GGATTCGTCA TGGGGCGAGC CCCGGACCGG TGACGCTTTC TGCTTGGAGG GTGACGAGGA ATGGTCCACC CTTGAACGCT GGGAAATGCG CACTGTGGAG TCGGCGCGGG GCCTGATCCG GCCAAGTATC GATCGCGACG ATTCCGGTGA GCTCGCTCTG GGTAGTGAAC TCCCGGAGAA CCACGCGGTC GTGCTGCTCA CGGATATCGG AGCCCGACGC AAAGTCACCA AGGCGGGCAA ACGAGGCCGA TGCCTTTGGG CTACCGGCAT TCTCGGCGGC AAGTCCATGG CCGTGGCGCC CGAGGCTTGG GAGATCTATC GACAATCTTG CGACGGCGCG GACGACCGAC GGCGTCTGCT GGCCCCGCCC AAGGCTGAGA GCGGCCGCCG GATCGCGAAT CCGCGGAGCC GGGTCGCCTC GAGCGGTGGC GACTCCCACG ATCGACGTCG TTTCGCGGAG GTGAAATGGT GGGGAACCTA CGCAGATGGC AATCGGCGCG AGAGTGATGT TCGCATCGGG TGGCGGTCAA TGGTTACCGG ATTCCTCTTT CCGGGTGAGG TAGTTTGGGT CCTGGCTGAT GGCGAGAAAG TCACCCGCAT CGAGCATTCG GCGATCTGGC GGGAATTGGG CGCTCAGCCC CTGTCGGAAC GAGTACCCAG GCAAGCCCTG CCATGCACTG ATCCGGCCAT GCACGCGCCG GAACTCGGGG AGCGCCAAGG ATTGTGCTTG TCCTGCGAGA TCTTCGGGTC GGTCGATCCC AAGGGCACCG ACCAAGGCGG TCAGCAGACC GCCTATGCCG GTCATGTGCG TTTCGGGACC GCGACGGCGG AACCGGGCGC CCGGGTCGAG CAAATCGACC TCGCACCGTT GGGTGCACCC CGGTTGGGCG CCGGAATGTT CAGCCTGCAG GACAGGTCGT TGACCAGCCG TCGGGGCGGG TCGCCCCCCG GGCAGTGGGG ATCGGCCAGC GACAAGCCGC GGCCGCGTGG CCTCCGCGGC CGAAAGTTTT ACTGGAACAG CGATCCCGAC GAGCAGGCGG CCGCCTGGAC CGGCCAGCTC CAGCGCAGCG TGAGCGTGAC CCCGCGCCAC CAGCGGCGAC CATCTCAGCG GGAGTTCGGC GGGCGTCGCG ATCTGCTGGC GCCCGGCACC ACCCTGCGTC AGACCATCCG CTTCGACGCG CTGTCCCCGG CCGGCTTGCA TTCCCTGCTC GCTGTGCTGG ATCCCGCGCG GGTGCTGCCG GCCCTGGGCG GCCCGGGTTA TCACGTGCGC CTCGGCGGTG GCCGGCCGTT CGGTCTCGGG GCGGTGGCCG TGCGGATCGA GTCCTGCACG ATCGAAACCA TCGGCGATCG CTACCGGCGG GCCGAGCCCG CGCCGGCCGG ACCGCCACCG GCGCACGACC CCGCGGCCGT GAGTGGCTAT CTGGACCAAG CGGCCTGCGT CGGTCTGGCC CGTATCCTGA ATCCGCACGG GCTGGGCGAC GATCGCCACC TGGTCTCCTA CCCGCCCGGC GACGTCTGGG AACGCGTCAA CACCCAGCGA TTCGACGAAA GCTACCGGTT CTTCACTGAG AACAACGGTC AGCAGTTCAA GACCCGCGTC AACCCATGGG CCCCGTTGCC GACCCTGCCC ACCACATCGG GCGAAGCCTT CCGCGCCAGT CAACCGATCC ACCCCAGCGG TGGGCGATAG
|
Protein sequence | MPQLDSTSFV NPYTFVAISD VIPRRRPPGH DGGNRLGPNG QPLYSGSLDV TWTLATPMLL PAGEISCNVD GAVQVPGASV KGAVRSLHEA MFRGCLRVVD EGFLPSYRQI AGSKPQPPWR LGVVQRSTAA GKPIAIKLCE ETVWVDGPSL LAAYGRQDSS WGEPRTGDAF CLEGDEEWST LERWEMRTVE SARGLIRPSI DRDDSGELAL GSELPENHAV VLLTDIGARR KVTKAGKRGR CLWATGILGG KSMAVAPEAW EIYRQSCDGA DDRRRLLAPP KAESGRRIAN PRSRVASSGG DSHDRRRFAE VKWWGTYADG NRRESDVRIG WRSMVTGFLF PGEVVWVLAD GEKVTRIEHS AIWRELGAQP LSERVPRQAL PCTDPAMHAP ELGERQGLCL SCEIFGSVDP KGTDQGGQQT AYAGHVRFGT ATAEPGARVE QIDLAPLGAP RLGAGMFSLQ DRSLTSRRGG SPPGQWGSAS DKPRPRGLRG RKFYWNSDPD EQAAAWTGQL QRSVSVTPRH QRRPSQREFG GRRDLLAPGT TLRQTIRFDA LSPAGLHSLL AVLDPARVLP ALGGPGYHVR LGGGRPFGLG AVAVRIESCT IETIGDRYRR AEPAPAGPPP AHDPAAVSGY LDQAACVGLA RILNPHGLGD DRHLVSYPPG DVWERVNTQR FDESYRFFTE NNGQQFKTRV NPWAPLPTLP TTSGEAFRAS QPIHPSGGR
|
| |