Gene Namu_1246 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_1246 
Symbol 
ID8446842 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp1368280 
End bp1370439 
Gene Length2160 bp 
Protein Length719 aa 
Translation table11 
GC content68% 
IMG OID645040380 
Producthypothetical protein 
Protein accessionYP_003200639 
Protein GI258651483 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.534306 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.385301 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCAGC TCGATAGCAC GAGCTTCGTC AACCCGTATA CCTTCGTGGC GATCTCCGAT 
GTGATCCCGA GGCGCCGGCC GCCGGGGCAC GACGGTGGCA ACCGGCTGGG GCCTAATGGG
CAGCCGCTTT ACTCCGGTTC GCTCGACGTC ACCTGGACTC TGGCGACACC CATGCTCCTG
CCTGCCGGCG AGATCAGCTG CAATGTGGAC GGCGCCGTGC AGGTTCCCGG GGCGTCGGTC
AAGGGGGCCG TCCGTTCGCT GCACGAAGCC ATGTTCCGGG GCTGCCTGCG GGTGGTCGAC
GAGGGCTTTC TTCCGTCATA TCGGCAGATC GCCGGGTCCA AGCCGCAGCC ACCGTGGCGG
CTGGGCGTGG TGCAGCGGTC CACGGCGGCT GGAAAGCCGA TCGCGATCAA GCTGTGTGAG
GAGACGGTCT GGGTAGACGG CCCGAGCCTG TTGGCTGCCT ACGGTCGTCA GGATTCGTCA
TGGGGCGAGC CCCGGACCGG TGACGCTTTC TGCTTGGAGG GTGACGAGGA ATGGTCCACC
CTTGAACGCT GGGAAATGCG CACTGTGGAG TCGGCGCGGG GCCTGATCCG GCCAAGTATC
GATCGCGACG ATTCCGGTGA GCTCGCTCTG GGTAGTGAAC TCCCGGAGAA CCACGCGGTC
GTGCTGCTCA CGGATATCGG AGCCCGACGC AAAGTCACCA AGGCGGGCAA ACGAGGCCGA
TGCCTTTGGG CTACCGGCAT TCTCGGCGGC AAGTCCATGG CCGTGGCGCC CGAGGCTTGG
GAGATCTATC GACAATCTTG CGACGGCGCG GACGACCGAC GGCGTCTGCT GGCCCCGCCC
AAGGCTGAGA GCGGCCGCCG GATCGCGAAT CCGCGGAGCC GGGTCGCCTC GAGCGGTGGC
GACTCCCACG ATCGACGTCG TTTCGCGGAG GTGAAATGGT GGGGAACCTA CGCAGATGGC
AATCGGCGCG AGAGTGATGT TCGCATCGGG TGGCGGTCAA TGGTTACCGG ATTCCTCTTT
CCGGGTGAGG TAGTTTGGGT CCTGGCTGAT GGCGAGAAAG TCACCCGCAT CGAGCATTCG
GCGATCTGGC GGGAATTGGG CGCTCAGCCC CTGTCGGAAC GAGTACCCAG GCAAGCCCTG
CCATGCACTG ATCCGGCCAT GCACGCGCCG GAACTCGGGG AGCGCCAAGG ATTGTGCTTG
TCCTGCGAGA TCTTCGGGTC GGTCGATCCC AAGGGCACCG ACCAAGGCGG TCAGCAGACC
GCCTATGCCG GTCATGTGCG TTTCGGGACC GCGACGGCGG AACCGGGCGC CCGGGTCGAG
CAAATCGACC TCGCACCGTT GGGTGCACCC CGGTTGGGCG CCGGAATGTT CAGCCTGCAG
GACAGGTCGT TGACCAGCCG TCGGGGCGGG TCGCCCCCCG GGCAGTGGGG ATCGGCCAGC
GACAAGCCGC GGCCGCGTGG CCTCCGCGGC CGAAAGTTTT ACTGGAACAG CGATCCCGAC
GAGCAGGCGG CCGCCTGGAC CGGCCAGCTC CAGCGCAGCG TGAGCGTGAC CCCGCGCCAC
CAGCGGCGAC CATCTCAGCG GGAGTTCGGC GGGCGTCGCG ATCTGCTGGC GCCCGGCACC
ACCCTGCGTC AGACCATCCG CTTCGACGCG CTGTCCCCGG CCGGCTTGCA TTCCCTGCTC
GCTGTGCTGG ATCCCGCGCG GGTGCTGCCG GCCCTGGGCG GCCCGGGTTA TCACGTGCGC
CTCGGCGGTG GCCGGCCGTT CGGTCTCGGG GCGGTGGCCG TGCGGATCGA GTCCTGCACG
ATCGAAACCA TCGGCGATCG CTACCGGCGG GCCGAGCCCG CGCCGGCCGG ACCGCCACCG
GCGCACGACC CCGCGGCCGT GAGTGGCTAT CTGGACCAAG CGGCCTGCGT CGGTCTGGCC
CGTATCCTGA ATCCGCACGG GCTGGGCGAC GATCGCCACC TGGTCTCCTA CCCGCCCGGC
GACGTCTGGG AACGCGTCAA CACCCAGCGA TTCGACGAAA GCTACCGGTT CTTCACTGAG
AACAACGGTC AGCAGTTCAA GACCCGCGTC AACCCATGGG CCCCGTTGCC GACCCTGCCC
ACCACATCGG GCGAAGCCTT CCGCGCCAGT CAACCGATCC ACCCCAGCGG TGGGCGATAG
 
Protein sequence
MPQLDSTSFV NPYTFVAISD VIPRRRPPGH DGGNRLGPNG QPLYSGSLDV TWTLATPMLL 
PAGEISCNVD GAVQVPGASV KGAVRSLHEA MFRGCLRVVD EGFLPSYRQI AGSKPQPPWR
LGVVQRSTAA GKPIAIKLCE ETVWVDGPSL LAAYGRQDSS WGEPRTGDAF CLEGDEEWST
LERWEMRTVE SARGLIRPSI DRDDSGELAL GSELPENHAV VLLTDIGARR KVTKAGKRGR
CLWATGILGG KSMAVAPEAW EIYRQSCDGA DDRRRLLAPP KAESGRRIAN PRSRVASSGG
DSHDRRRFAE VKWWGTYADG NRRESDVRIG WRSMVTGFLF PGEVVWVLAD GEKVTRIEHS
AIWRELGAQP LSERVPRQAL PCTDPAMHAP ELGERQGLCL SCEIFGSVDP KGTDQGGQQT
AYAGHVRFGT ATAEPGARVE QIDLAPLGAP RLGAGMFSLQ DRSLTSRRGG SPPGQWGSAS
DKPRPRGLRG RKFYWNSDPD EQAAAWTGQL QRSVSVTPRH QRRPSQREFG GRRDLLAPGT
TLRQTIRFDA LSPAGLHSLL AVLDPARVLP ALGGPGYHVR LGGGRPFGLG AVAVRIESCT
IETIGDRYRR AEPAPAGPPP AHDPAAVSGY LDQAACVGLA RILNPHGLGD DRHLVSYPPG
DVWERVNTQR FDESYRFFTE NNGQQFKTRV NPWAPLPTLP TTSGEAFRAS QPIHPSGGR