Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_1224 |
Symbol | |
ID | 8446820 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | + |
Start bp | 1346092 |
End bp | 1347030 |
Gene Length | 939 bp |
Protein Length | 312 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 645040359 |
Product | Integrase catalytic region |
Protein accession | YP_003200618 |
Protein GI | 258651462 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.401317 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATCTGCG CCTACATCGA CGCGCACAAG CATCGTTTCG GGGTCGAGCC GATCTGCCGG GTGTTGTCCG AGCACGCCAT GCCGATCGCC CCGAGCAGCT ACTACGCGCA CCGCCGCCGG CCGGTCAGCC CTGCGCTGCG GGCCGAGGCG CACCTGGTCA ACACCGTCAT CGACCTGCAC CGTGAGCACC ACGGCCTGTA CGGGGTGCGC AAGATGTGGC ATCTGATGAC CCAGGAAGGG CACTTGGTCG GCCGGGACCA GGTCGCCCGA TTGATGACCA TCGCCGGGCT GCGGGGTGTG CGCCGCGGCG ACCACCGCAC CACGACGACC CGCCGCCGCG CCGCCGACGA CCGGCCCCGG CCGGTGGACC TGATCAACCG GGACTGGGCG GCGCCGACCC GGCCGGACCA GTGGTGGGTC GCGGACTTCA CCTACGTCTG GACCCCGGCC GGGTTCTGCT ACGTGTCCTT CGTGGTTGAC GTGTACTCCC GCCGGATCCT GGGCTGGCGG GTCGCCTCGT CGATGACGAC CGCACTGGTC GCCGCCGCCC TCGATCAGGC CCTGTTCACC CGGCGCCGCA CCGATACCCG TTTCACCTCA ACTGGTCTGG TTCATCACTC GGATGCCGGG TCGCAATACA CGTCAATCGC CTACACCACC GCGCTGGTCG ATGCCGGGAT CGCGCCGTCG ATCGGTTCGG TCGGGGATGC CCTGGACAAC GCGCTCATGG AGTCGACCAT CGGCCTGTAC AAGACCGAGC TGATCGACCG GTACCGGCGC TCTTGGGCCG GCCCGCAGCA GGTCGAGACC GCGACCGCCG GCTGGGTGCA CTGGTTCAAT ACCCGCCGAC TGCACTCCTC GATCGACTAC CGGCCACCCG TCACCTACGA GCAGCTGTAC CGTCAGCAGA CCAGCGCCCC GGCCGGGGAG GCTGCGTAA
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Protein sequence | MICAYIDAHK HRFGVEPICR VLSEHAMPIA PSSYYAHRRR PVSPALRAEA HLVNTVIDLH REHHGLYGVR KMWHLMTQEG HLVGRDQVAR LMTIAGLRGV RRGDHRTTTT RRRAADDRPR PVDLINRDWA APTRPDQWWV ADFTYVWTPA GFCYVSFVVD VYSRRILGWR VASSMTTALV AAALDQALFT RRRTDTRFTS TGLVHHSDAG SQYTSIAYTT ALVDAGIAPS IGSVGDALDN ALMESTIGLY KTELIDRYRR SWAGPQQVET ATAGWVHWFN TRRLHSSIDY RPPVTYEQLY RQQTSAPAGE AA
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