Gene Namu_1176 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_1176 
Symbol 
ID8446772 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp1293154 
End bp1293597 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content69% 
IMG OID645040313 
Productribosomal protein L13 
Protein accessionYP_003200572 
Protein GI258651416 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0102] Ribosomal protein L13 
TIGRFAM ID[TIGR01066] ribosomal protein L13, bacterial type 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.20646 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.874786 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCACGT ACAGCCCCAA GCCTGGCGAT GTGACCCACG ACTGGCACGT CATCGACGCG 
ACCGACGTCG TGCTGGGCCG CCTGGCCAGC CAGGCCGCAC AGCTGCTGCG TGGCAAGCAC
AAGCCGATCT ACGCCCCGCA CGCCGACACC GGCGATTTCG TGGTGATCAT CAACGCGTCG
AAGGTCGCGG TCAGCGGCAA CAAGCGTGAC GCCAAGCTGC TGTACCGGCA CTCCGGCTAC
CCGGGCGGGC TGCGCAGCCA GACCGTTGGG CAGCTGCTGG ACACCCGGCC GGAGCGGCTG
GTGGAGAAGG CGATCGTGGG CATGCTCCCG CACAACACCC TGGGCCGCTC CCTGGCCCGC
AAGCTGAAGG TCTACCCCGG CGCGGAGCAC CCGCACGCCG CGCAGAAGCC GCAGCCGTAC
GAGATCACCC AGGTCGCCCA GTAA
 
Protein sequence
MRTYSPKPGD VTHDWHVIDA TDVVLGRLAS QAAQLLRGKH KPIYAPHADT GDFVVIINAS 
KVAVSGNKRD AKLLYRHSGY PGGLRSQTVG QLLDTRPERL VEKAIVGMLP HNTLGRSLAR
KLKVYPGAEH PHAAQKPQPY EITQVAQ