Gene Namu_1119 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_1119 
Symbol 
ID8446715 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp1247817 
End bp1249007 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content66% 
IMG OID645040256 
Producttranslation elongation factor Tu 
Protein accessionYP_003200515 
Protein GI258651359 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0050] GTPases - translation elongation factors 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00485] translation elongation factor TU 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGAAGG CGAAGTTCGA CCGGAGCAAG CCGCACGTCA ACATTGGCAC CATCGGCCAC 
GTTGACCATG GCAAGACCAC CCTGACCGCG GCGATCACCA AGGTTCTGGC GGATAAGTAC
CCGACCCTGA ACCAGGCGTC GGCCTTCGAT CAGATCGACA AGGCGCCGGA AGAGCGTCAG
CGCGGCATCA CCATCAACAT CGCGCACGTC GAGTACCAGA CCGAGAAGCG TCACTACGCG
CACGTCGACG CCCCCGGTCA CGCCGACTAC ATCAAGAACA TGATCACCGG TGCCGCCCAG
ATGGACGGTG CGATCCTGGT CGTGGCCGCC ACCGACGGCC CGATGCCGCA GACCAAGGAG
CACGTGCTGC TGGCCCGCCA GGTCGGCGTG CCCTACATCC TGGTCGCGCT GAACAAGTCC
GACATGGTCG ACGACGAGGA GATCCTGGAG CTCGTCGAGC TCGAGGTCCG CGAGCTGCTG
GCCGGTCAGG ACTTCGACGA GGACGCCCCG GTCATCCGGA CCTCCGGCCT GAAGGCGCTC
GAGGGAGACC CGGAGTGGGT CAAGACCGTC GAGGACCTGA TGGACGCGGT CGACGAGTCG
ATTCCGGAGC CCGAGCGGGA CACCGACAAG CCGTTCCTGA TGCCGATCGA GGACGTCTTC
ACGATCACCG GTCGTGGCAC CGTCGTCACC GGCAAGGTGG AGCGTGGCGT CATCAACGTC
AACGCCACCG TCGAGATCGT CGGCATCAAG CCGAAGTCCT TCCAGACCAC GGTCACCGGC
ATCGAGATGT TCCGCAAGCT GCTCGACACC GCTCAGGCCG GCGACAACGC CGGTCTGCTG
CTGCGCGGCA CCAAGCGTGA GGACGTCGAG CGCGGCCAGG TCGTCGTCAA GCCGGGCTCG
ATCACCCCGC ACACCGAGTT CGAGGCCCAG GTCTACATCC TGGGCAAGGA CGAGGGCGGC
CGGCACACGC CGTTCTTCAA CAACTACCGC CCGCAGTTCT TCTTCCGCAC CACCGACGTG
ACCGGTGTGG TGAACCTCCC CGAGGGCACC GAGATGGTCA TGCCGGGCGA CACCACCGAG
ATGACCGTTC AGCTGATCCA GCCGATCGCC ATCGAGGAGG GCCTGCGCTT CGCCATCCGC
GAGGGTGGCC GCACCGTGGG CGCCGGTTCG GTGACCAAGA TCATCAAGTG A
 
Protein sequence
MAKAKFDRSK PHVNIGTIGH VDHGKTTLTA AITKVLADKY PTLNQASAFD QIDKAPEERQ 
RGITINIAHV EYQTEKRHYA HVDAPGHADY IKNMITGAAQ MDGAILVVAA TDGPMPQTKE
HVLLARQVGV PYILVALNKS DMVDDEEILE LVELEVRELL AGQDFDEDAP VIRTSGLKAL
EGDPEWVKTV EDLMDAVDES IPEPERDTDK PFLMPIEDVF TITGRGTVVT GKVERGVINV
NATVEIVGIK PKSFQTTVTG IEMFRKLLDT AQAGDNAGLL LRGTKREDVE RGQVVVKPGS
ITPHTEFEAQ VYILGKDEGG RHTPFFNNYR PQFFFRTTDV TGVVNLPEGT EMVMPGDTTE
MTVQLIQPIA IEEGLRFAIR EGGRTVGAGS VTKIIK