| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_1064 |
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| Symbol | |
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| ID | 8446660 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | + |
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| Start bp | 1180219 |
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| End bp | 1184145 |
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| Gene Length | 3927 bp |
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| Protein Length | 1308 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 645040202 |
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| Product | DNA-directed RNA polymerase subunit beta' |
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| Protein accession | YP_003200461 |
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| Protein GI | 258651305 |
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| COG category | [K] Transcription |
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| COG ID | [COG0086] DNA-directed RNA polymerase, beta' subunit/160 kD subunit |
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| TIGRFAM ID | [TIGR02386] DNA-directed RNA polymerase, beta' subunit, predominant form |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.268145 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTCGACG TCAACTTCTT CGACGAGTTG CGTATCGGTC TCGCCACCGC CGACGACATC
CGCGCGTGGT CCCACGGCGA GGTCAAGAAG CCGGAAACCA TCAATTACCG CACGCTCAAG
CCGGAAAAGG ACGGGCTCTT CTGCGAGAAG ATCTTCGGGC CGACCCGGGA CTGGGAGTGC
GCCTGCGGCA AGTACAAGCG TGTCCGCTTC AAGGGCATCA TCTGCGAGCG CTGCGGCGTC
GAGGTCACCC GCGCCAAGGT GCGTCGCGAG CGGATGGGCC ACATCGAGCT GGCCGCACCG
GTCACCCATA TCTGGTACTT CAAGGGCGTC CCGTCGCGCT TGGGCTACCT GCTCGACCTG
GCCCCGAAGG ATCTCGAGAA GATCATCTAC TTCGCGGCCT ACCTGATCAC CGCGGTCGAC
GAGACGGCTC GGCACAATGA CCTGCCGACC ATCGAGGCCG AGATGGGCGT CGAGCGCAAG
AACCTGGAGA ACGCGCGGGA CGCCGACATC GACGCCCGGG CCAAGAAGCT CGAGGCCGAC
CTGGCCGAGC TGGAGGCCGA GGGCGCCAAG TCCGACGTGC GCCGCAAGGT GCGCGAGGGC
GGCGAGCGCG AGCAGCGGCA GATCCGCGAC CGTGCGCAGC GGGCCATCGA CCGCCTCGAC
GAGGTGCTCG ACCTGTTCCG CAAGCTCTCG GTGCGCCAGC TGATCGTCGA CGAGGTGCTC
TACCGCGAGC TGGAGGACCG CTTCGGCGAC TACTTCACCG GCGGCATGGG GGCCGAGGCG
CTCAAGCAGA TCATCTCGGA CTTCGACATC GACGCCGAGG TCGAGATCCT GCGCGACACC
ATCAAGAACG GCAAGGGCCA GCGCAAGATC CGCGCGATCA AGCGGCTCAA GGTCGTCGCG
GCGTTCCAGA TGACGCAGAA CTCGCCGCTG GGCATGGTGC TGGACTGCGT GCCGGTGATC
CCGCCGGAGC TGCGGCCGAT GGTGCAGCTG GACGGTGGCC GGTTCGCCAC CTCCGACCTC
AACGACCTGT ACCGGCGCGT GATCAACCGG AACAACCGGC TCAAGCGACT GATCGATCTG
GGCGCGCCCG AGATCATCGT CAACAACGAG AAGCGGATGC TGCAGGAGGC CGTCGACGCG
TTGTTCGACA ACGGCCGCCG TGGCCGTCCG GTCACCGGGC CGGGCAACCG CCCGCTCAAG
TCGCTGTCCG ATCTGCTCAA GGGCAAGCAG GGCCGGTTCC GCCAGAACCT GCTGGGCAAG
CGTGTCGACT ACTCGGGCCG TTCGGTCATC GTGGTCGGCC CGCAGCTCAA GCTGCACCAG
TGCGGTCTGC CCAAGCTGAT GGCGCTCGAG CTGTTCAAGC CGTTCGTGAT GAAGCGCCTG
GTCGACCTGA ACCACGCGCA GAACATCAAG TCGGCCAAGC GCATGGTCGA GCGGCAGCGG
CCGCAGGTGT GGGACGTCCT GGAAGAGGTC ATCTCCGCGC ACCCGGTGAT GCTGAACCGG
GCGCCGACCC TGCACCGCCT GGGCATCCAG GCCTTCGAGC CGCAGCTGGT GGAAGGCAAG
GCCATCCAGC TGCACCCGCT GGTCTGTGCC GCGTTCAACG CCGACTTCGA CGGCGACCAG
ATGGCCGTGC ACGTGCCGCT GTCGTCCGAG GCGCAGGCCG AGGCTCGCGT GCTGATGCTC
TCGAGCAACA ACATCCTGTC CCCGGGTTCG GGCCGGCCGC TGGCCATGCC CTCGCTGGAC
CTGGTGACCG GCCTGTACTA CCTGTGTGGG TACAAGCCGG AGGCCAAGGG GGCCGGCTCG
GTGTTCTCCT CGCCCGCCGA GGGGATCATG GCGCTGGACG CCGGACTGAT CGATCTGCGC
GCGCCGATCA AGGTGCGGCT GCCCGGTTCG GTCAAGCCGT CGAAGGACAC CCTGGCTGCG
CTGGGAGAGG ACTACGAGGC GGGCCAGCCC TGGCTGGCCG AGACCACGCT GGGCCGGGTC
CTGTTCAACG AGCTGCTGCC CGACGGGTAC CCGTTCGTGA ACGAGGAGCT GCCCAAGAAG
CGGCAGGCCG TCATCGTCAA CGATCTGGCC GAGCACTACC CGATGTCCGT GGTGGCGCAG
GTGCTGGACC GCCTGAAGGA GGCGGGCTTC CACTGGGCGA CCCGCTCGGG CATGACGGTG
GCCATCGGTG ACGTCATCAT CCCGCCGGAG AAGGAAGAGA TCCTGCTCCG TCACGAGATC
GAGGCGGAGC GGGTCGAGAA GGCCTACCAG CGGGGCAACC TCTCCCACGA GGAGCGCAAC
GACGACCTGG TCAAGATCTG GGAGGCGGCC ACCCGGGAGA TCGAGGAGGC GCTGCCTCCG
GCGTACCCGG CCGACAACCC GGTGTCCACC CTGGTGAACG CCGGCGCCGC CGGTAACTGG
ATCCAGGTCC GGTCGCTGGC CGGCATGAAG GGTGTGGTGG CCAACTCCAA GGGTCAGCAG
ATCCCGCGGC CGATTCGCTC CTCGTTCCGC GAGGGCCTGT CGGTGCTGGA GTACTTCATC
AACACCCACT CGGCCCGTAA GGGTCTGGCC GACACCGCGC TGCGAACGGC GGAGTCGGGC
TACCTGACCC GTCGTCTGGT CGACGTGTCG CAGGACGTCA TCGTGCGCGA GACCGACTGT
GGCACCGAGC GTGGCGTCAC CCTGCCGATG GCCGATCGGT ACGCCGACGG CAGCCTGCAC
ATCAACGAGT TCATCGAGAC CTCGGTGCAG GGTCGGGTGC TGGCCGGTGA CCTGGTCGCC
GAGGACGGCA CGGTCGTCGT GCCGGCCGGT ACGGACATGC GCGAGCACCA CGTGCGGGAC
GCGGTCAACG CCGGGATCAC CCTGGCCAAG GTCCGTTCCG TGCTGACCTG CGAGGCGGCC
ATCGGCACCT GTGCGGTCTG CTACGGCCGC TCGTTGGCCA CCGGCAACCT GGTGGACGTG
GGCGAGGCCG TCGGCATCGT GGCCGCGCAG TCCATCGGTG AGCCCGGCAC GCAGCTGACC
ATGCGGACCT TCCACACCGG GGCGGCGTCG GGTTCCTCCG ACATCACCCA GGGTCTGCCG
CGTGTGCAGG AGCTGTTCGA GGCCCGGGTC CCCAAGGGCA AGGCGCCGAT CGCCGACGCC
GCCGGCCGGA TCCGGATCGA GGACGCCGAC AAGTTCTTCA AGATCATCGT CACCCCGGAC
GACGGGTCGG AGGAGATCGT GTACGAGAAG CTGCCCAAGA CGCAGCGGCT CGCGACGATG
ACCGTCGACG GCTCCGAGCG TCTGCTGGTG GACGGCGATC ACGTGTCGGT CGGCCAGCAG
CTGCTCGAGG GCAACCCGGA TCCGCATGAG GTGCTGCGGG TCATGGGCCA GCGCGAGGTG
CAGCTGCACC TGGTGCGAGA GGTGCAGAAC GTGTACCGCT CGCAGGGCGT GGGCATCCAC
GACAAGCACA TCGAGGTGAT CATCCGGCAG ATGCTGCGGC GGGTCACGAT CATCGACTCC
GGCTCGACCG AGTTCCTGCC GGGTGCGGTG ATCGAGCGCA AGGAGTTCGA GGCGTCCAAC
CGTCGCGTGC TGGCCGAGGG TGGCGAGCCC GCGGCCGGGC GTCCCGCGCT CATGGGCATC
ACCAAGGCGT CGCTGGCCAC CGAGTCCTGG CTGTCGGCGG CCTCCTTCCA GGAGACCACC
CGGGTGCTCA CCGACGCGGC AATCAACGCC AAGTCGGACA AGCTCGTGGG CCTGAAGGAG
AACGTGATCA TCGGCAAGCT GATCCCGGCC GGCACCGGCA TCGCCCGGTA CCGGGACATC
CAGGTGCAGC CGACCGAGGA GGCCCGCGCG GCCGCCTACA CGCTGCCCTC GTTCGACGAC
ACCTACTACG GGGCCGACAC CTTCGGGGTC GCCACCGGTG CCGCGGTGCC GCTGGACGAC
TTCGATCTGG GCCGCGACTA CCGCTGA
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| Protein sequence | MLDVNFFDEL RIGLATADDI RAWSHGEVKK PETINYRTLK PEKDGLFCEK IFGPTRDWEC
ACGKYKRVRF KGIICERCGV EVTRAKVRRE RMGHIELAAP VTHIWYFKGV PSRLGYLLDL
APKDLEKIIY FAAYLITAVD ETARHNDLPT IEAEMGVERK NLENARDADI DARAKKLEAD
LAELEAEGAK SDVRRKVREG GEREQRQIRD RAQRAIDRLD EVLDLFRKLS VRQLIVDEVL
YRELEDRFGD YFTGGMGAEA LKQIISDFDI DAEVEILRDT IKNGKGQRKI RAIKRLKVVA
AFQMTQNSPL GMVLDCVPVI PPELRPMVQL DGGRFATSDL NDLYRRVINR NNRLKRLIDL
GAPEIIVNNE KRMLQEAVDA LFDNGRRGRP VTGPGNRPLK SLSDLLKGKQ GRFRQNLLGK
RVDYSGRSVI VVGPQLKLHQ CGLPKLMALE LFKPFVMKRL VDLNHAQNIK SAKRMVERQR
PQVWDVLEEV ISAHPVMLNR APTLHRLGIQ AFEPQLVEGK AIQLHPLVCA AFNADFDGDQ
MAVHVPLSSE AQAEARVLML SSNNILSPGS GRPLAMPSLD LVTGLYYLCG YKPEAKGAGS
VFSSPAEGIM ALDAGLIDLR APIKVRLPGS VKPSKDTLAA LGEDYEAGQP WLAETTLGRV
LFNELLPDGY PFVNEELPKK RQAVIVNDLA EHYPMSVVAQ VLDRLKEAGF HWATRSGMTV
AIGDVIIPPE KEEILLRHEI EAERVEKAYQ RGNLSHEERN DDLVKIWEAA TREIEEALPP
AYPADNPVST LVNAGAAGNW IQVRSLAGMK GVVANSKGQQ IPRPIRSSFR EGLSVLEYFI
NTHSARKGLA DTALRTAESG YLTRRLVDVS QDVIVRETDC GTERGVTLPM ADRYADGSLH
INEFIETSVQ GRVLAGDLVA EDGTVVVPAG TDMREHHVRD AVNAGITLAK VRSVLTCEAA
IGTCAVCYGR SLATGNLVDV GEAVGIVAAQ SIGEPGTQLT MRTFHTGAAS GSSDITQGLP
RVQELFEARV PKGKAPIADA AGRIRIEDAD KFFKIIVTPD DGSEEIVYEK LPKTQRLATM
TVDGSERLLV DGDHVSVGQQ LLEGNPDPHE VLRVMGQREV QLHLVREVQN VYRSQGVGIH
DKHIEVIIRQ MLRRVTIIDS GSTEFLPGAV IERKEFEASN RRVLAEGGEP AAGRPALMGI
TKASLATESW LSAASFQETT RVLTDAAINA KSDKLVGLKE NVIIGKLIPA GTGIARYRDI
QVQPTEEARA AAYTLPSFDD TYYGADTFGV ATGAAVPLDD FDLGRDYR
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