| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_0966 |
|---|
| Symbol | |
|---|
| ID | 8446558 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | - |
|---|
| Start bp | 1059265 |
|---|
| End bp | 1060437 |
|---|
| Gene Length | 1173 bp |
|---|
| Protein Length | 390 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 645040101 |
|---|
| Product | acyl-CoA dehydrogenase domain protein |
|---|
| Protein accession | YP_003200364 |
|---|
| Protein GI | 258651208 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACGGCCC GTCGACTGCT GCCCACCGAC GAGGCGGTCG ATCTGCTCAA GCTGGTGCGC
GAGATCGCCG ACCGTGAGTT GGCGCCGCGG GCCGCCCGGG ACGAGGCGGC CGAGCAGTTC
CCGCGAGACG TCTTCCGGAT GCTCGGCCAG ACCGGCCTGC TCGGCCTGCC CTACCCGGAG
GAGGTCGGCG GCGGCGGCCA GCCCTACGAG GTCTACCTGC AGGTGTTGGA GGAGGTCGGT
GCGGTCTGGG CCAGCGTGGG CGTCGGGATG AGCGTGCACG TGCTCAGCTG CTTCCCGTTG
GCTCACTACG GCACCGACGC GCAGCGCGCG CAGTGGCTGC CGGACCTGCT GGCCGGCGAC
CTGCTCGGCG CCTACTGCCT GTCCGAAGCG CAAGCCGGGT CCGACCCGGC GGCCCTGCGC
ACCACGGCCC GGCGCGACGG TGACGAGTAC GTGCTCAACG GCGCCAAGGC GTGGACGACG
CACGGCGGGC ACGCCGACTT CTACCTGGTG ATGGCCCGCA CCTCCGACGA GCGGACCGGC
ATCTCCAGCT TCCTGGTGCC GGCCGACACT GCCGGGCTGA TCGCCGACCC ACCCGAACGC
AAGATGGGCC TGACCGGTTC GGCGACCGCG ACCGTGCGCC TGGAACAGGC TCGGGTCCCG
GTCGAGCGGC GGATCGGCGC CGAGGGCGAG GGCCTGCGCA TCGCGTTGGC CGCCTTGGAC
TCCGGACGGT TGGGGATCGC CGCGGTGGCC ACCGGACTGG CCCAGGGTGC GCTCGACCGG
GCCGTCGCGT ACGCCCGGGA GCGGCAGACC TTCGGTCAGG CGATCATCGA CCACCAGGGA
CTGGGATTCC TGCTGGCCGA CATGGAGGCG GCGGTACAGA CCGCCCGGGC GATGTACCTG
CACGCCGCCC GCCTGCGCGA CCAGGGACTG CCGTTCAGCC GGGAGGCGGC CATTGCCAAG
CTGGTCGCCA CCGACAACGC GATGAAGGTG ACCACGGACG CGGTGCAGGT GCTCGGCGGC
TCCGGCTACA CCCGCGACTT CCCGGTCGAG CGCTACATGC GCGAGGCCAA GGTGATGCAG
ATCTTCGAGG GCACCAACCA GATCCAGCGG CTGGTCATCT CCCGCTCGCT GCGGCGCGAC
GATCGGGGCG GGATCGGCCG TCTCGGCGGC TGA
|
|---|
| Protein sequence | MTARRLLPTD EAVDLLKLVR EIADRELAPR AARDEAAEQF PRDVFRMLGQ TGLLGLPYPE
EVGGGGQPYE VYLQVLEEVG AVWASVGVGM SVHVLSCFPL AHYGTDAQRA QWLPDLLAGD
LLGAYCLSEA QAGSDPAALR TTARRDGDEY VLNGAKAWTT HGGHADFYLV MARTSDERTG
ISSFLVPADT AGLIADPPER KMGLTGSATA TVRLEQARVP VERRIGAEGE GLRIALAALD
SGRLGIAAVA TGLAQGALDR AVAYARERQT FGQAIIDHQG LGFLLADMEA AVQTARAMYL
HAARLRDQGL PFSREAAIAK LVATDNAMKV TTDAVQVLGG SGYTRDFPVE RYMREAKVMQ
IFEGTNQIQR LVISRSLRRD DRGGIGRLGG
|
|---|
| |