Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_0808 |
Symbol | |
ID | 8446400 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | - |
Start bp | 892962 |
End bp | 893630 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 645039945 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003200208 |
Protein GI | 258651052 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 45 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAGCTC CCCCTGGGCG GGCCGCGCCC CTGCCCCCCG AGGAACGCCG CTCGGCGATC GTCGCCGCGG CGATCCCGTT GGTCTGCGAC CACGGCGCCA CCGTCACCAC CCGGGAGATC GCCGAGGCGG CCGGGATCGC CGAGGGCACG ATCTTCCGGG TCTTCCCGGA CAAGGACGCG GTGATCCGCG CCGTCGTGGA GAAGGTGCTC GACCCCACCC CGTTCGTCGA CGACCTGCGC AGCATCGATC CTGATCGGCC GCTCGAGCAC GTCCTGGCCG ATGCGGTCGA GTCGATGCGT CAGCGGCTGG CCAGCGTCTG GCGGATCGTG TGGATGCTGC GCTGGGTCGG GCCGCCGGGC AGCGGGGACG AGCAGTCCAA GTACGCCCCG TCGGCGCGCC CGGACATGAC CGCGGCCAAC GACGCGGTGG CCGAGCTGCT GCTGCCGCAT CGCCACCGGC TCCGCCTGCC GCCGCTGGAG GCCGCCCGGA TGTTCCGGCT GGTCACCTTC TCGGCGGTGC ACCCTGCGAT CACCGACGGG AACCCGCTAC CCACCGACCA GATCGTCGAC CTGCTGCTGC ACGGCATCGG GGTCGGCCCC CACCCGCAGG CAACCGAGTC CCCGATCCAC CGATGGGAAT CCGCCGCCGA ACAAGTCGGA GTGTTGTGA
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Protein sequence | MPAPPGRAAP LPPEERRSAI VAAAIPLVCD HGATVTTREI AEAAGIAEGT IFRVFPDKDA VIRAVVEKVL DPTPFVDDLR SIDPDRPLEH VLADAVESMR QRLASVWRIV WMLRWVGPPG SGDEQSKYAP SARPDMTAAN DAVAELLLPH RHRLRLPPLE AARMFRLVTF SAVHPAITDG NPLPTDQIVD LLLHGIGVGP HPQATESPIH RWESAAEQVG VL
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