Gene Namu_0808 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_0808 
Symbol 
ID8446400 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp892962 
End bp893630 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content72% 
IMG OID645039945 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003200208 
Protein GI258651052 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGCTC CCCCTGGGCG GGCCGCGCCC CTGCCCCCCG AGGAACGCCG CTCGGCGATC 
GTCGCCGCGG CGATCCCGTT GGTCTGCGAC CACGGCGCCA CCGTCACCAC CCGGGAGATC
GCCGAGGCGG CCGGGATCGC CGAGGGCACG ATCTTCCGGG TCTTCCCGGA CAAGGACGCG
GTGATCCGCG CCGTCGTGGA GAAGGTGCTC GACCCCACCC CGTTCGTCGA CGACCTGCGC
AGCATCGATC CTGATCGGCC GCTCGAGCAC GTCCTGGCCG ATGCGGTCGA GTCGATGCGT
CAGCGGCTGG CCAGCGTCTG GCGGATCGTG TGGATGCTGC GCTGGGTCGG GCCGCCGGGC
AGCGGGGACG AGCAGTCCAA GTACGCCCCG TCGGCGCGCC CGGACATGAC CGCGGCCAAC
GACGCGGTGG CCGAGCTGCT GCTGCCGCAT CGCCACCGGC TCCGCCTGCC GCCGCTGGAG
GCCGCCCGGA TGTTCCGGCT GGTCACCTTC TCGGCGGTGC ACCCTGCGAT CACCGACGGG
AACCCGCTAC CCACCGACCA GATCGTCGAC CTGCTGCTGC ACGGCATCGG GGTCGGCCCC
CACCCGCAGG CAACCGAGTC CCCGATCCAC CGATGGGAAT CCGCCGCCGA ACAAGTCGGA
GTGTTGTGA
 
Protein sequence
MPAPPGRAAP LPPEERRSAI VAAAIPLVCD HGATVTTREI AEAAGIAEGT IFRVFPDKDA 
VIRAVVEKVL DPTPFVDDLR SIDPDRPLEH VLADAVESMR QRLASVWRIV WMLRWVGPPG
SGDEQSKYAP SARPDMTAAN DAVAELLLPH RHRLRLPPLE AARMFRLVTF SAVHPAITDG
NPLPTDQIVD LLLHGIGVGP HPQATESPIH RWESAAEQVG VL