Gene Namu_0730 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_0730 
Symbol 
ID8446317 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp802041 
End bp802853 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content78% 
IMG OID645039865 
ProductFlp pilus assembly protein TadB-like protein 
Protein accessionYP_003200133 
Protein GI258650977 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4965] Flp pilus assembly protein TadB 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.258746 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTCTCG GGGCTCCGGC CGGTTGCCTG GTCCTGGCGG TCGCGCTCGC CGCGTGGCCG 
ACGCCCGCCC GGACCGCCCC ACCCGGACCC ACCGCCGGCC GGCCACGGTG GGCCTGGTCG
GCCCGGCCGT CGGCGGTGGC CGGCCTGATC ACCGCCGGCG CCGCCGCGCT CGGCCCGATG
GCGGCCGCGA CGGTGGTGGC CGGCCCGAGC GGGTTGCTGG CCGCGGCCAT GCTGGCCTCC
ACCGTCGCCC TGCTGGCCAG CCGGATGCTG GACCGCCGGC GCCGGCGGCG GGGGATGCCC
GAGATCCTGC GGGGATTGCG GGCTCTGGGA CGCGAGCTGC GCTCGGGGGC GGACCCGCTG
ACCGCGGCCC GGGGCGCGGC GGCGGCCGCA ACCGGCGCCG GCGGGCTGCT GCTGGATTCG
CTGGTCGTGC TGATGCGCAC CGTCGACGAG AGCCCCGCGC GGGCGGCCCG GTCGCCGGAC
GACCCGGCCG GGGTGCTGGC GTTCCTGAGT AGCGGGTGGT TGCTCAGCCG CCGGCACGGG
GTCGCGTTCG GGCGGGTGGT CACTGCGGTC GCCGACGAGT TGTCCGATCA GCTGGCCGCC
GATCAGACCC GGACCGCCCA GCTGGCCGGC CCGCGGATGT CCGGGTACGT GATGGCTGCC
CTGCCGCTGA TGGGGGTGGT GCTGGGCGCG GGTATGGGGG TCGACCCGGT GGCCGTGCTG
CTCGGGTCCC CGCTGGGCAA CCTGCTTCTG GTCATCGGGG TGGCGCTGCT GTGCGCCGGC
CTGCTCTGGT CGGCCCGGAT CGTGGGCCGA TGA
 
Protein sequence
MGLGAPAGCL VLAVALAAWP TPARTAPPGP TAGRPRWAWS ARPSAVAGLI TAGAAALGPM 
AAATVVAGPS GLLAAAMLAS TVALLASRML DRRRRRRGMP EILRGLRALG RELRSGADPL
TAARGAAAAA TGAGGLLLDS LVVLMRTVDE SPARAARSPD DPAGVLAFLS SGWLLSRRHG
VAFGRVVTAV ADELSDQLAA DQTRTAQLAG PRMSGYVMAA LPLMGVVLGA GMGVDPVAVL
LGSPLGNLLL VIGVALLCAG LLWSARIVGR