Gene Namu_0661 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_0661 
Symbol 
ID8446247 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp729143 
End bp730168 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content73% 
IMG OID645039796 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_003200065 
Protein GI258650909 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones59 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAGG CGCTGCTGAC GGTCACCGAC CTGACCGTCA CCTTCAACCG GCGGGGCGTG 
GCCCCGATGA AGGCGGTGGA CGGGGTCAGC TTCTCCGTCG CGCCGGGGCA GACCGTCGGG
CTGGTCGGCG AGTCCGGCTG CGGCAAGTCG GTGACGTCGC TGGCGATCAT GCGGCTGCTG
CCCCCGCGGG GCAACAGCGT CACCGGCGTC GTCGAGTTCG AAGGCACCGA CCTGCTCGGC
CTGCCGCTGA ACGCCATGCG GGACCGCCGC GGCCGCGATC TGGCGATGAT CTTCCAGGAC
CCGCTGTCGT CGCTGAACCC GGTGGTGCCC ATCGGGATCC AGGTGACCGA GGTGCTCGAG
CGGCACCGCG GGATGAAGCG GTCGGCGGCG ATGGGTGAGG CCCGGGACCT GCTGGACTCG
GTCGGCATTC CCGACCCCGG CCGGCGGCTC AAGGAGTACC CGCACCAGCT CTCCGGCGGC
ATGCGGCAGC GGGCACTGAT CGCGATGGCC CTGGCCTGCC GGCCGCGGCT GCTCATCGCC
GACGAGCCGA CCACCGCGCT GGACGTGACG ATCCAGGCCC AGATCCTGGC CCTGCTCAAG
TCGCTGGTCG TCGAACACGG CACCGCGCTG ATCATGATCA CGCACGACCT GGGCGTGGTC
GCCGGCCTGT GCGACGAGGT CAACGTGCTC TACGCCGGCC GGGTCGTCGA GCGGGCCGAC
CGGCACGAGC TGTTCGCCGT GCCCCGGCAC CCGTACACGC ACGGGCTGCT CGAATCGATC
CCGCGGTTGG ACGCCGGGCC GGGGGAGCGG CTGACGCCGA TCGTCGGGTC GGTCGCCGAC
AACATCCCGT GGACCGGCGG GTGCGCGTTC GCCCCGCGGT GTTCGCGGGA GATCGATCCG
TGCCGCCAGG TCACGCCGCT GCTGGAGCCG GCCCCCCAGG CGGCCCCGGA TCACCTGCAG
CGCTGCCACA ACCCGGTCGT CCCGGCCGCG GTGGGCGGCC CCGACCTGAC CAAGGGGGCG
TCATGA
 
Protein sequence
MSEALLTVTD LTVTFNRRGV APMKAVDGVS FSVAPGQTVG LVGESGCGKS VTSLAIMRLL 
PPRGNSVTGV VEFEGTDLLG LPLNAMRDRR GRDLAMIFQD PLSSLNPVVP IGIQVTEVLE
RHRGMKRSAA MGEARDLLDS VGIPDPGRRL KEYPHQLSGG MRQRALIAMA LACRPRLLIA
DEPTTALDVT IQAQILALLK SLVVEHGTAL IMITHDLGVV AGLCDEVNVL YAGRVVERAD
RHELFAVPRH PYTHGLLESI PRLDAGPGER LTPIVGSVAD NIPWTGGCAF APRCSREIDP
CRQVTPLLEP APQAAPDHLQ RCHNPVVPAA VGGPDLTKGA S