| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_0597 |
|---|
| Symbol | |
|---|
| ID | 8446181 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | + |
|---|
| Start bp | 657842 |
|---|
| End bp | 658858 |
|---|
| Gene Length | 1017 bp |
|---|
| Protein Length | 338 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 645039730 |
|---|
| Product | 2-nitropropane dioxygenase NPD |
|---|
| Protein accession | YP_003200001 |
|---|
| Protein GI | 258650845 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 50 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGGAC TGGTCGATCT CGCGGTGGCC GCGACGGTCC TGGCCGCACC GATGGCCGGC
GGGCCGAGCA CGCCCGATCT GGTGACGGCC ACCGCCGCGG CCGGCAGCCT GGGGTTCCTG
GCCGGCGGAT ACCGGACCGC GGCCCAGCTG GCCGCGCAGA TCGCCGAGGT TCGGGCGATC
ACCCCGACGT TCGGGGTGAA TCTGTTCGCG CCCAACCCGA TTCCGGTCGA CCCCCAGGCC
TACGCGCAGT ACGCCGCCCG GTTGGCCGAG CGGGCGGACC ACTTCGGTGT CGTGTTGCCG
CCCCGGCCCA TCGAGGACGA CGACGGCTGG CCGGACAAAC TCGACCTGCT GATCGAGGAC
CCGGTGCCGC TGGTCAGCTT CACGTTCGGG CTACCGCCGG CCAGGGCGAT CCGGGCCCTG
CAGCGCGCCG GCAGCGCGGT CGCCCAGACG GTGACCGGCC CCGCGGAAGC GCGCTGGGCG
CTGGACGCCG GAGCCGACCT GCTCATCGTG CAAAGCGCCG ACGCCGGCGG GCATTCCGCG
GTCTTCGATC CCTCGGTCCG CCCGCCATCC CCGGCGCTGC CGGACCTCAT CCGGCAGATC
GCGGCGACCA CACCGCGGCC GCTGATCGCG GCCGGCGGGT TGTCCTCGGC CGACCGGGTG
GCGGCGGCGC TCCGGGCGGG CGCGGCCGCC GTCATGGTCG GCACGGCCTT GCTGCTGGCG
GACGAGGCCG GGACCTCGGC CGTGCATCGG GCGGCGATCG CCGGGCGTCC CGGTCCGACC
GTGATCACCC GGGCGTTCAC CGGTCGCCCG GCCCGCGGAC TGGTCAACGA GTTCATCGTG
CAGTTCGAAC CACGGGCGCC GCTGGGCTAC CCGGCCCTGC ACCACCTGAC CAGCCCGCTG
CGCAAGGCCG CGGCCGCCGC CGGCGATCCG GAATGGGTGC ACCTGTGGGC CGGAACCGGC
CACGGCGCCG TCACTCCCGG GCCGGTCGCC GACATCCTGC GGCGCCTGGC CGTCTGA
|
|---|
| Protein sequence | MSGLVDLAVA ATVLAAPMAG GPSTPDLVTA TAAAGSLGFL AGGYRTAAQL AAQIAEVRAI
TPTFGVNLFA PNPIPVDPQA YAQYAARLAE RADHFGVVLP PRPIEDDDGW PDKLDLLIED
PVPLVSFTFG LPPARAIRAL QRAGSAVAQT VTGPAEARWA LDAGADLLIV QSADAGGHSA
VFDPSVRPPS PALPDLIRQI AATTPRPLIA AGGLSSADRV AAALRAGAAA VMVGTALLLA
DEAGTSAVHR AAIAGRPGPT VITRAFTGRP ARGLVNEFIV QFEPRAPLGY PALHHLTSPL
RKAAAAAGDP EWVHLWAGTG HGAVTPGPVA DILRRLAV
|
|---|
| |