Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_0541 |
Symbol | |
ID | 8446125 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | - |
Start bp | 601016 |
End bp | 603217 |
Gene Length | 2202 bp |
Protein Length | 733 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 645039675 |
Product | hypothetical protein |
Protein accession | YP_003199946 |
Protein GI | 258650790 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 49 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCTTCTG AACGCTTCAA GCTAGCGCTG GATCAAGTGG GACCAGACAA TTGGCGCGAA TTCGAAGTTC TTGCCGCCGA GTTTCTTGTA ACTGACTATC CAAGCCTGCG CACTATGGCG GCAAGCACCG GAGACAAAGG GCGTGACGGA GAGCTCTTTT CACCCTCAGA AAACTCTTCG AGCGTGGCCA TTCAGTACTC AGTCGCCGAG AACTGGAAGG ACAAAATATC TAAGACCCTG AAGCGACTCG AAGAAACCAT GCCTAACCTC AGAACTCTGA TATACGTAAC TAATCAACGC ATTGGACCGT CGGCGGACGA GCTTAAGAGG AAGATTCAGG AAAAAGGAAT TACGGTCGAC GTGAGGGACC AAAGTTGGTT TCTCGAGCGC GAGCTGACGT CACCTCAACG GCAGGTTGCG GCCGCCGAAC TGGCTGAACG ATTCGTGGAT CCGCTTCTGT CAGCCCGGGG AGTCAAGCAA ACAGTCGCCA CCGTCCTGGA CGACTCAGAA GCGCAGGTTG CGCTTCTACA CTTGGCATTG GACGTCCAAG ACAAAGCGAC CGACAAGGGC TTGACAAAGA CGTCGTTCGA GACCTTGGTG ATCGCAGCAC TTGAAGGCAC GACTTCGGAC CGAACCATCG GTTCGGACCA GATCATTCAA CGAGTTTGTG CCATGATGCC CTCTGGCAAT CCGCGCCAGG TTCAGGAACA AGCGACAAGC GCTCTGAGGC GATTGACAAG CAAGGGCGGT CCCGTCCACT TCCATAAGTC GTCCGACTCT TATTGCCTCT CGCACGAAAA GGCTACCCAG GTCCGCGAAC GAATGGCCGA GTACGTCAAC GATGAGACGT CACTCGAACT CCAGATCAAA GACTTGGTCA ATGCAGCAGC TGATGGCGAG ATTGGCGCAA TCGAAGGAGA AGTCTTCGAT GCGTGCGCCC GAAATCTCCG AGGCGCCATA GAGCAGCTGC TACTGGAAAA AGGGGAGGCC TTTGCGGGAG CCGTCTCATC GGGGCGAATG GTACAACTGG ACGCGGAGCA GGTTCGCGCC GCCGTGGTGT CGTTGGTGCC CACAGAATTC CCCGTTACGG TAGAGCAGGC AGTTGGCATC ATTGTGGAAG TGATGCAACG ACCGCTGGGC TCAACTCGTC GTCACCTCCG CCGACTAGCC GACGCTTACA CACTTTTCGC CTTCCTGCGC CAGGTCCCCG ACGTGCAGAA GACTATTGTG AAGCTATTCG ACGGAGGACA TATCTGGCTA GACACCACAG TGATTCTCCC TATGCTTGCC GAGACGCTAA TCTTGGAACC CAGTGAACGG CCATTTACGG TCCTCCTTAA GGCCGCTCGC GAATCGGGTA TCCAATTGTT CGTCACAAGC GGAATCGTCG AAGAAGTAGA GCGACACATC AACCGGTCCC TGACCTTTGC GCGAGGAACA CGCGAAAAAT GGCGCGGATC GGTGCCATTC TTGTATGGCG TATTTGCTCT GTCGGGGAGG TCTCGTGCAA GTTTCTCGGG GTGGACGGAA GAGTTCCGGG GGGACGTTCG CCCCGAGGAC GACGTCGCAG AGGCGCTTTG GGGTCTCTTC AGGGTAGGAA AGCGTGACCT CCTGCAGTAT TCTGATGCAG CAGATTTGAG TCTCAGGGGC GCTGTTCAGG AAGTGTGGCA AGAAGCGCAC GACCGAAGGA GAGGGACGGG CGCCAATTCC GATCTAGATT CGATGACGGT AAACAGACTT GTTGCACACG ATGTTGAGAA CTGCGTAGGA GTAATTCAGC TCCGAAAAGG CCAGCCCGCC TCGCCCGTCG GATATAGGTC TTGGTTCTTA ACGATGGATC GGACTGCATT TTCTCTGGTT GACGAACTTC CGCGGCGGAT CGGGCCGAAA GCGCCAGGCT CCCCGATCAT CAGTCCGGAC TTTCTCTCCG AGTTCCTCCG CCTAGGCTCA TTGCGTACGG CAATCGACCA GGAATTGCGC GTGAACCTGC CAGTCGTTAC CGACCTGGGG CGGTTTGGCA ACTTCCCGGT CAACCTGGTC GAGACGGCTG AGGAGATCCG GCGCGAGAGT GGGGAGATTT CTGAGCGTTT GATCAGAAGA AGGGTACGGG ACACACTTGA TGCGGAGCGG CTTCGGCTTG GCGTGAAGGC ATACGGTGGC CTTTCCGCTG TGCGCGAGGA GTTTGCTTCG AAGTTCGGGT AG
|
Protein sequence | MASERFKLAL DQVGPDNWRE FEVLAAEFLV TDYPSLRTMA ASTGDKGRDG ELFSPSENSS SVAIQYSVAE NWKDKISKTL KRLEETMPNL RTLIYVTNQR IGPSADELKR KIQEKGITVD VRDQSWFLER ELTSPQRQVA AAELAERFVD PLLSARGVKQ TVATVLDDSE AQVALLHLAL DVQDKATDKG LTKTSFETLV IAALEGTTSD RTIGSDQIIQ RVCAMMPSGN PRQVQEQATS ALRRLTSKGG PVHFHKSSDS YCLSHEKATQ VRERMAEYVN DETSLELQIK DLVNAAADGE IGAIEGEVFD ACARNLRGAI EQLLLEKGEA FAGAVSSGRM VQLDAEQVRA AVVSLVPTEF PVTVEQAVGI IVEVMQRPLG STRRHLRRLA DAYTLFAFLR QVPDVQKTIV KLFDGGHIWL DTTVILPMLA ETLILEPSER PFTVLLKAAR ESGIQLFVTS GIVEEVERHI NRSLTFARGT REKWRGSVPF LYGVFALSGR SRASFSGWTE EFRGDVRPED DVAEALWGLF RVGKRDLLQY SDAADLSLRG AVQEVWQEAH DRRRGTGANS DLDSMTVNRL VAHDVENCVG VIQLRKGQPA SPVGYRSWFL TMDRTAFSLV DELPRRIGPK APGSPIISPD FLSEFLRLGS LRTAIDQELR VNLPVVTDLG RFGNFPVNLV ETAEEIRRES GEISERLIRR RVRDTLDAER LRLGVKAYGG LSAVREEFAS KFG
|
| |