Gene Namu_0518 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_0518 
Symbol 
ID8446101 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp576887 
End bp577783 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content66% 
IMG OID645039653 
Productribonuclease BN 
Protein accessionYP_003199925 
Protein GI258650769 
COG category[S] Function unknown 
COG ID[COG1295] Predicted membrane protein 
TIGRFAM ID[TIGR00765] YihY family protein (not ribonuclease BN) 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCACCG CGGATGGGCC GGTCCGCCGG CGCTGGCGCA AGGTGGCCCG ACGAACCCTG 
GCCAAGGCCT GGGGCGACTC ACTGTTCGGT ATGAGTGCGC AGGCCGCCTT CTGGAGCGCG
CTGTCCACCG CGCCCCTGTT GCTGGCCCTG CTCGGGTTGT CCGGATACGT GGCCCGGGCG
ATCGGGCCGA ACACCACCGG CGAGATCCGG GAACAGGTGA ACGTTTTCCT GCACACCATC
TTCAACCAGG AGGTCGCCGA CAACCTGATC GGGAACACCG TCGACGTCAT CCTGAACAGC
AGTCAGACCG ACGTCGTCTC CGTCGGGTTG ATCATCAGTC TGTGGGCCGG CTCCTCGGCC
ATGACTGCAT TCGTCGAGTC GATCGCCATC GCCTACGGCC AGCACGAGTT CCGCCATCCT
GTGCTGGAGC GGTTCTTCGC CCTCGGCCTG TACGTCGGCG CGCTCGCGGC CGGGATCGTG
ATGGTCCCGT TGCTGGCCAT CGGACCCGAT TACCTGCCCC GGTTGTTCCC GCCCGACTGG
CGGTCGGCGG TCAGCGAGAT CATCGGCTGG CTTTACTATC CCGGCCTGGC GATCGGGCTG
ATCCTGCTGC TGACCACCCT GTACAAGGTG GCGCCCAAGG ACAAGCACCG GTGGATGCGC
GGGTTGCCGG GAGCCTTCCT GGCCGCCGCG GTTTTCCTGA CGGCCAGCAC CGGACTTCGG
TTGTACCTGT CCTACGTCTA CGAGCACGGC CTGACCTACG GTGCGCTGGC CACGCCGATC
ACCTTCCTGC TGTTCTACTA CTTCATCTCG ATGGCCATCA TCATCGGCGC CCAGTTCAAC
AATGCCCTGC TGGAGTACTA CCCGCCGCGG ACGTCGCGCC GGCAGCGGCG CGGCTGA
 
Protein sequence
MPTADGPVRR RWRKVARRTL AKAWGDSLFG MSAQAAFWSA LSTAPLLLAL LGLSGYVARA 
IGPNTTGEIR EQVNVFLHTI FNQEVADNLI GNTVDVILNS SQTDVVSVGL IISLWAGSSA
MTAFVESIAI AYGQHEFRHP VLERFFALGL YVGALAAGIV MVPLLAIGPD YLPRLFPPDW
RSAVSEIIGW LYYPGLAIGL ILLLTTLYKV APKDKHRWMR GLPGAFLAAA VFLTASTGLR
LYLSYVYEHG LTYGALATPI TFLLFYYFIS MAIIIGAQFN NALLEYYPPR TSRRQRRG