Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_0396 |
Symbol | |
ID | 8445977 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | + |
Start bp | 428769 |
End bp | 430178 |
Gene Length | 1410 bp |
Protein Length | 469 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 645039537 |
Product | histidine kinase |
Protein accession | YP_003199811 |
Protein GI | 258650655 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 61 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 51 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGTCACCA AGAGACGGAT CGGGTTGTCG TTGCGGTGGC GGGTGGCCAT CGCCTTCGGA TTGGCGTCGG TCGCGGTGGC CGGCCTGGTG GCGGTGGCGA CTTGGCAACT GGCCACCACC TACATGCTCG ACCAGCGCCG GCAGAGCGCC ACTCTGCAAG CCACGGTGAA CGCGCAGTTG GTCGAGGCAT CATCGCGTTC CGGCTCGGGC AGCCTGGACG AGTTGCTCAG CGGGTTGGTG GTCGACCCCG GTTCGTCCAT TCTGCTGGCC CGGTCGGATG GTCTGCTGAC CAGCGGACGG GCGGTCGATC CGGCCGATCT GCCGTCGCAG TTGTTCACGC CCGACCCGGG AGAGACCAGA TGGCTCGTCA CCGAGATCGA CGGCATCCGG GTGCTGGCGA TCTCGCTGCA GGGTGGAAGC GCAGGCACCG TCTTCATCGA GCTGTTCCCG CTCGTGGAGC TGGGGCGGAT CCAGCACTTT CTGATCCTGG TGCTCGTCGC CGGAGCCGCG GCGAGTGGTC TGCTCGGGGT CGGCCTCGGT TGGTGGACCA GCAAGCGGGC CTTACGCCCG CTCACCGAGC TGACGGAATC GGCCGCCCGC GTCGCCGGCG GCGACCTGCA CGTCCGGCTA CCGGAGCAGA GCGACCCGGA CCTCGCGCCA TTGGCGTCGA CGTTCAACGC GACGGTCGAA GCGCTTGAGC GGCGGGTCCG CCTGGACGCC CGGTTTGCCG GCGACATCAG CCATGAGCTT CGCTCGCCGC TGACCACGAT GGTCAATGCC ATTGAAGTCC TCCGGCATCG GCAGGGGGAA ATCCCGGAGG TGGCCCGGCA GGCCGTCGAC CTTCTCGCCG GTGAGGTCGA ACGCTTCCGT AAGATGCTCC TCGATCTACT CGAGATCTCC CGCTCCGATG AGGATGTCGA TGACCGGGCA CTGGAGTCGA TCGATCTGGC GATCCTGGTC GCGAAGGTCA GGGACACCGG CCGCATGACC TTCCCCCTGG TCGTGGAGAA GCCGCCGCCG GCGATCTATG CCGATCGTCG TCGGCTGGTC AGGGTGGTGG CGAATCTGCT GGACAACGCC GAACGGCATG GCGGCGGGGT GGCCAAGGTG ACGGTCACCG AATGGCAGGG CCGGGCGCGC TTGGAGGTCG ACGACGCCGG CCCGGGAGTC CCGGTCGAGC TCAGAGAGCA GATCTTCGAG CGGTTTGCGC GTGGTCGGCA CGCCGGCGAA CGCGGTGGGG AGTCCGGAAG CGGGCTCGGC CTCGCGCTGG TCGCCCGGCA TGTTCGGCTG CATTCCGGTG CGGTCTGGGT GGAGGACGCA CCTGGCGGGG GCGCTCGCTT TGTCGTCGAG TTGCCCGCGG CCAATGACGA CGCCGGGCAC CCGGAAGTCG GTCCGAGCAT TGCCCGGTGA
|
Protein sequence | MVTKRRIGLS LRWRVAIAFG LASVAVAGLV AVATWQLATT YMLDQRRQSA TLQATVNAQL VEASSRSGSG SLDELLSGLV VDPGSSILLA RSDGLLTSGR AVDPADLPSQ LFTPDPGETR WLVTEIDGIR VLAISLQGGS AGTVFIELFP LVELGRIQHF LILVLVAGAA ASGLLGVGLG WWTSKRALRP LTELTESAAR VAGGDLHVRL PEQSDPDLAP LASTFNATVE ALERRVRLDA RFAGDISHEL RSPLTTMVNA IEVLRHRQGE IPEVARQAVD LLAGEVERFR KMLLDLLEIS RSDEDVDDRA LESIDLAILV AKVRDTGRMT FPLVVEKPPP AIYADRRRLV RVVANLLDNA ERHGGGVAKV TVTEWQGRAR LEVDDAGPGV PVELREQIFE RFARGRHAGE RGGESGSGLG LALVARHVRL HSGAVWVEDA PGGGARFVVE LPAANDDAGH PEVGPSIAR
|
| |