Gene Namu_0396 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_0396 
Symbol 
ID8445977 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp428769 
End bp430178 
Gene Length1410 bp 
Protein Length469 aa 
Translation table11 
GC content68% 
IMG OID645039537 
Producthistidine kinase 
Protein accessionYP_003199811 
Protein GI258650655 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones61 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTCACCA AGAGACGGAT CGGGTTGTCG TTGCGGTGGC GGGTGGCCAT CGCCTTCGGA 
TTGGCGTCGG TCGCGGTGGC CGGCCTGGTG GCGGTGGCGA CTTGGCAACT GGCCACCACC
TACATGCTCG ACCAGCGCCG GCAGAGCGCC ACTCTGCAAG CCACGGTGAA CGCGCAGTTG
GTCGAGGCAT CATCGCGTTC CGGCTCGGGC AGCCTGGACG AGTTGCTCAG CGGGTTGGTG
GTCGACCCCG GTTCGTCCAT TCTGCTGGCC CGGTCGGATG GTCTGCTGAC CAGCGGACGG
GCGGTCGATC CGGCCGATCT GCCGTCGCAG TTGTTCACGC CCGACCCGGG AGAGACCAGA
TGGCTCGTCA CCGAGATCGA CGGCATCCGG GTGCTGGCGA TCTCGCTGCA GGGTGGAAGC
GCAGGCACCG TCTTCATCGA GCTGTTCCCG CTCGTGGAGC TGGGGCGGAT CCAGCACTTT
CTGATCCTGG TGCTCGTCGC CGGAGCCGCG GCGAGTGGTC TGCTCGGGGT CGGCCTCGGT
TGGTGGACCA GCAAGCGGGC CTTACGCCCG CTCACCGAGC TGACGGAATC GGCCGCCCGC
GTCGCCGGCG GCGACCTGCA CGTCCGGCTA CCGGAGCAGA GCGACCCGGA CCTCGCGCCA
TTGGCGTCGA CGTTCAACGC GACGGTCGAA GCGCTTGAGC GGCGGGTCCG CCTGGACGCC
CGGTTTGCCG GCGACATCAG CCATGAGCTT CGCTCGCCGC TGACCACGAT GGTCAATGCC
ATTGAAGTCC TCCGGCATCG GCAGGGGGAA ATCCCGGAGG TGGCCCGGCA GGCCGTCGAC
CTTCTCGCCG GTGAGGTCGA ACGCTTCCGT AAGATGCTCC TCGATCTACT CGAGATCTCC
CGCTCCGATG AGGATGTCGA TGACCGGGCA CTGGAGTCGA TCGATCTGGC GATCCTGGTC
GCGAAGGTCA GGGACACCGG CCGCATGACC TTCCCCCTGG TCGTGGAGAA GCCGCCGCCG
GCGATCTATG CCGATCGTCG TCGGCTGGTC AGGGTGGTGG CGAATCTGCT GGACAACGCC
GAACGGCATG GCGGCGGGGT GGCCAAGGTG ACGGTCACCG AATGGCAGGG CCGGGCGCGC
TTGGAGGTCG ACGACGCCGG CCCGGGAGTC CCGGTCGAGC TCAGAGAGCA GATCTTCGAG
CGGTTTGCGC GTGGTCGGCA CGCCGGCGAA CGCGGTGGGG AGTCCGGAAG CGGGCTCGGC
CTCGCGCTGG TCGCCCGGCA TGTTCGGCTG CATTCCGGTG CGGTCTGGGT GGAGGACGCA
CCTGGCGGGG GCGCTCGCTT TGTCGTCGAG TTGCCCGCGG CCAATGACGA CGCCGGGCAC
CCGGAAGTCG GTCCGAGCAT TGCCCGGTGA
 
Protein sequence
MVTKRRIGLS LRWRVAIAFG LASVAVAGLV AVATWQLATT YMLDQRRQSA TLQATVNAQL 
VEASSRSGSG SLDELLSGLV VDPGSSILLA RSDGLLTSGR AVDPADLPSQ LFTPDPGETR
WLVTEIDGIR VLAISLQGGS AGTVFIELFP LVELGRIQHF LILVLVAGAA ASGLLGVGLG
WWTSKRALRP LTELTESAAR VAGGDLHVRL PEQSDPDLAP LASTFNATVE ALERRVRLDA
RFAGDISHEL RSPLTTMVNA IEVLRHRQGE IPEVARQAVD LLAGEVERFR KMLLDLLEIS
RSDEDVDDRA LESIDLAILV AKVRDTGRMT FPLVVEKPPP AIYADRRRLV RVVANLLDNA
ERHGGGVAKV TVTEWQGRAR LEVDDAGPGV PVELREQIFE RFARGRHAGE RGGESGSGLG
LALVARHVRL HSGAVWVEDA PGGGARFVVE LPAANDDAGH PEVGPSIAR