| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_0346 |
|---|
| Symbol | |
|---|
| ID | 8445927 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | - |
|---|
| Start bp | 380931 |
|---|
| End bp | 382031 |
|---|
| Gene Length | 1101 bp |
|---|
| Protein Length | 366 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 645039491 |
|---|
| Product | fatty acid desaturase |
|---|
| Protein accession | YP_003199765 |
|---|
| Protein GI | 258650609 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG3239] Fatty acid desaturase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 63 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCTCTT TATCCATTCC CCGTGAGCAG CGCGCCGTCT CGGCGGCCGC CCGTCGACCC
CGACGAGTAC TCACCGACTA CGCCGAGTTG CTGGGCCGGG TGCAGGCCCA GGGCCTGATG
GAGCGCCGGT ACGCCGCCTA CGCGATCAAG GGCGGCCTGC TGCTGGCGGC CTTCGCCGGG
GTGTGGTGCG CCTTCTTCCT GCTCGGCGAA TCCTGGCTGC AGCTCGTCAT CGCCGCTGTC
TTCGGCGTGG TGCTAGCCCA GTTCGGCTTT CTCGGACACG ACGCCGCACA TCGGCAGATC
CTGCGGTCCG GTCCACGCAA CGAAACCCTG GCCCGCGTGG TGGCCGGCCT GTTCTGCGGG
ATGAGTTCGA CCTGGTGGGC GCGCAAGCAC ACGCGACATC ACCTGGCGCC CAATCAGATC
GGCAAGGATC CCGACATCGA TCCGTCGGTG TTGCACTTCT ATCCGACCGA GACGGTGCCT
CGCTCCCGGG TGCTGGCCTT CCTCCGGGCG CATCAGGGTT GGTGGTTCTT CCCGATCCTG
ATGTTCGAGG GATTGCACCT GCACGTCCAG GGGTTCCGGA CCGTGCTGGG CCGCAGCCCG
ATCACCCATC GATGGACCGA GTTGGGATTC ATGGCCGCCC GGATGGGTGG TTACGTCGCG
GTGCTGCTGA TCTTCCTGCC GGTTGGCATG GCCGCAGCGT TCCTGGGCGT GCAGCTGGCC
GTCCTGGGCG TCTATCTCGG CTGCACCTTC GCCCCCAGCC ACAAGGGCAT GCCGATCCTG
CCGCCCGAGG CCAAGATCGA CTTCCTGCGC CGTCAGGTGC TGATGTCGCG CAACATCACC
GGCTCTCACC TGACCACCTT TGCGATGGGT GGCCTGAACT ACCAGATCGA GCACCACCTG
TTCCCGTCGA TGCCCGGCCC GAATCTGCGC CATGCCCGGA CCACGATCCG CGAGTTCTGC
CAGCAGCGTG GGGTCACGTA CACCGAGACC AGCCTGCTCA CGTCCTACGG GATCGTGATC
CGGTACCTCA ATCGGGTCGG CCTGCGAGGC GAACTGGACT CGTTCCAGTG CCCGATCATC
GCCGCCCACC GGCCGATCTG A
|
|---|
| Protein sequence | MTSLSIPREQ RAVSAAARRP RRVLTDYAEL LGRVQAQGLM ERRYAAYAIK GGLLLAAFAG
VWCAFFLLGE SWLQLVIAAV FGVVLAQFGF LGHDAAHRQI LRSGPRNETL ARVVAGLFCG
MSSTWWARKH TRHHLAPNQI GKDPDIDPSV LHFYPTETVP RSRVLAFLRA HQGWWFFPIL
MFEGLHLHVQ GFRTVLGRSP ITHRWTELGF MAARMGGYVA VLLIFLPVGM AAAFLGVQLA
VLGVYLGCTF APSHKGMPIL PPEAKIDFLR RQVLMSRNIT GSHLTTFAMG GLNYQIEHHL
FPSMPGPNLR HARTTIREFC QQRGVTYTET SLLTSYGIVI RYLNRVGLRG ELDSFQCPII
AAHRPI
|
|---|
| |