Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_0143 |
Symbol | |
ID | 8445723 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | - |
Start bp | 155676 |
End bp | 156896 |
Gene Length | 1221 bp |
Protein Length | 406 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 645039290 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_003199565 |
Protein GI | 258650409 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 78 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTGCGG GACTCATCGC CCTCGCGCTC GGCGGCTTCG GGATCGGCCT GACCGAATTC ACCATCATGG GTCTGCTGCC CGAGGTCGCG GCCGACTTCG GCGTCAGCGA GGCGGCGGCG GGCTGGCTCA TCACCGGGTA CGCCCTGGCG GTGATCGTCG GGGCGCTCGG GCTGACCGCC GCGACCACCC GGCTGCCTCG CAAACGGGTG CTGCTCGGAC TGCTCGTGCT GTTCGTCATC GGCAACGCCA TCAGTGCGCT GGCCCCCACC TACTCGGTGA TGATGGCCGG CCGGATCGTC GCGGCGCTGT GCCACGGCGC CTTCTTCGGC ATCGGCGCGG TCGTCGCGGC CGATCTGGTT GCCCCCGCCC GCAAGGCCGG GGCGGTGGCC ATCATGTTCA CCGGGCTGAC CGCGGCGAAC GTTCTCGGCG TCCCCCTGGG CACCTTCATC GGCCAGCAGT TCGGCTGGCG GGCCACGTTC TGGTCGATCA CCGTCATCGG CCTGGTCGCC TTCGTCGGCG TGCTCGCCCT GGTACCGCAG GATCGCGGCC GGCACGTGCC TACCCGCCTG CGGGACGAGG TCGGCGCGCT GCGCGACCGG CAGGTGTGGC TGTCGATGGC GGTGACCGTG CTCGGCTTCG GCGGCATGTT CGGGGCGTTC ACCTACATCG CCTACACGCT CACCGAGGTG ACCGGGTTCG CGTCGTCGAC GGTGCCGTGG CTGCTGGTGC TGTTCGGGGC CGGCCTGCTC GTCGGCAATG TGCTGGGCGG CCGGTTCGCC GACCGCGCGC TGGACCGCAG CCTGATCGTC ATCCTCGCCG GGCTGGTGCT GGTCCTGGTC GGGTTCGCGC TGGCCGCGAC GAGCCCGTGG GGCACCGTGG TGATGATCTT CCTGATGGGC GGGTTCGGCT TCGCCACCGT GCCCGGCCTG CAGACCCGCG TGATGACCTA CGCCGCGCAG GCACCGTCGC TGGCCTCGGC CGGCAACATC GCCGCGTTCA ACCTCGGCAA CGCCCTGGGT GCGCTGGCCG GCGGCCTGAC CATCGGAGCC GGACTGGGCT ACACCTCACC GATCTGGGCC GGCGCCGCGA TCACCGCGGC CGCGCTGGTG GTGATGGTGG TCGCCGCCCG GACCGCGCCC CGACCGGTGC CGGCGCTCAC CGCGCCGGCA CCCGTCCCCG CCGCGACGGC GCCGGTCGGG ACCGAGGACC GCAGCAGGTA G
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Protein sequence | MPAGLIALAL GGFGIGLTEF TIMGLLPEVA ADFGVSEAAA GWLITGYALA VIVGALGLTA ATTRLPRKRV LLGLLVLFVI GNAISALAPT YSVMMAGRIV AALCHGAFFG IGAVVAADLV APARKAGAVA IMFTGLTAAN VLGVPLGTFI GQQFGWRATF WSITVIGLVA FVGVLALVPQ DRGRHVPTRL RDEVGALRDR QVWLSMAVTV LGFGGMFGAF TYIAYTLTEV TGFASSTVPW LLVLFGAGLL VGNVLGGRFA DRALDRSLIV ILAGLVLVLV GFALAATSPW GTVVMIFLMG GFGFATVPGL QTRVMTYAAQ APSLASAGNI AAFNLGNALG ALAGGLTIGA GLGYTSPIWA GAAITAAALV VMVVAARTAP RPVPALTAPA PVPAATAPVG TEDRSR
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