| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_0107 |
|---|
| Symbol | |
|---|
| ID | 8445687 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | + |
|---|
| Start bp | 115891 |
|---|
| End bp | 118062 |
|---|
| Gene Length | 2172 bp |
|---|
| Protein Length | 723 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 645039255 |
|---|
| Product | glutamine synthetase catalytic region |
|---|
| Protein accession | YP_003199530 |
|---|
| Protein GI | 258650374 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3968] Uncharacterized protein related to glutamine synthetase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 50 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGGTA GTCAGTCACG TCGCCAGGCG ATCAACGCGG TCACCGGGTA TCAGGTGCCC
GATAAGGACT TCACCGAGCC GCTGGGAGAG CTGTTCGGCC GCAACACGTT CAGCCCCGCG
GTGATGAAGT CGCGGTTGCC CAAGTCGGTC TACAAGTCGG TCATGTCGAC CATCGACAAG
GGCACGCCGC TGGACCCGAC GGTGGCCGAC GTCGTCGCCT CGGCGATGAA GGACTGGGCC
CTGGAGAACG GTGCGTCGCA CTACGCGCAC GTGTTCTACC CGCTGACCGG GCTGACCGCC
GAGAAGCACG ACTCGTTCCT CTCGCCCGAG GACAGCGGCG CCTCCATGGC CGAGTTCGCG
GGCAAGACGC TGATCCAGGG CGAGCCGGAC GCCTCCAGCT TCCCCAACGG CGGCATCCGC
AACACGTTCG AGGCCCGCGG GTACACCGGA TGGGACGTCA CCAGCCCGGC GTACATCCTG
GAGAACCCGA ACGGCAACAC CCTGTGCATC CCCACCGTGT TCATCTCCTG GACCGGTGAG
GCGCTGGACA AGAAGACCCC GCTGCTGCGC TCGCAGCAGG CGATGAGCAA GCAGGCCGCC
CGCGTGCTCA CGCTGTTCGG CCACGACGAC ATCGACACCG TCGTGTCCTA CGCCGGGGCC
GAGCAGGAGT ACTTCCTGAT CGACCGGCAT TTCTACTTCT CCCGCCCGGA CCTGATGTCC
AGCGGCCGGA CCCTGTTCGG CGCCAAGCCG GCCAAGGGCC AGCAGTTCGA CGACCACTAC
TTCGGCGCCA TCCCGGAGCG GGTGCTGGCG TTCATGATCG AGGTGGACCG GGAGCTGTTC
AAGCAGGGCA TCCTGGCCAA GACCCGGCAC AACGAGGTCG CCCCGGGCCA ATTCGAGATC
GCTCCGCTGT TCGAGAAGGC CAACCTGGCC CACGACCACC AGCAGCTGAT GATGACCACC
CTGCAGCGGG TGGCGCAGCG CTACGGCATG GAGTGCCTGC TGCACGAGAA GCCGTTCGCC
GGCGTCAACG GCTCGGGCAA GCACGTCAAC TTCTCCATCG GCAACGGCAA CCAGGGCAAC
CTGCTCAACC CGGGCGACAC CCCGCACGAG AACGTGCAGT TCCTGGTGTT CTGCGCGGCC
GTCATCCGGG GCGTGCACAA GTACGGCGGC GTGCTCCGCG CCGTCGTCGC CTCGGCCCGC
AACGACCACC GGCTGGGCGC CAACGAGGCC CCGCCGGCGA TCATCTCGAT CTTCCTGGGC
GAGCAGCTGG CCGATGTGTT CGACCAGATC GCCGCGGGCG CGCTGACCGG CTCCAAGCCG
GCCGGCACGC TGACCCTGGG TGTGGACACC CTGCCGCCAT TCAAGGCCGA TCCGGGCGAC
CGCAACCGGA CCAGCCCGTT CGCCTTCACC GGCAACCGGT TCGAGTTCCG CGCGCCCGGT
TCCTCGCAGT CGATCTCCGG ACCGATGGTC GCGATCAACA CGATCCTGGC CGACTCGCTG
GACTACATCG CCACCGAGTT GGAGGCCCTG ATCGAGGGCG GCATGGAGTT CGACGCCGCG
GTGCAGAAGG TGCTCAAGGA CATCATCACC GAGCACGGCG CCGTGGTGTT CAACGGTGAC
GGCTACGCCG ACGCCTGGCA GGTGGAGGCG GCCGAGCGCG GCCTGCCCAA CCTCAAGACC
ACCGTCGACG CGCTGCCCCA GTTCGACCGG CCCGAGGTCA AGGACCTGTT CGAGAAGTAC
GGGGTGCTGT CCAACCGGGA GCTGGCCAGC CGGCTCGAGG TCTACCTGGA GCAGTACGCG
CTCTCGGTGA TGCTCGAGGC GTCCGAGACG CTGGAGATCG CCAAGACCAA GATCCTGCCG
GCGGCCATCC GCTACCAGGG TGAGCTGGCC GGCGCGGCGA TGAACCTCAA GGCCATCGGC
ATGTCCTTCG ACTCGCCCAC CCTGGACGCC ATCACCGCCT CCGTCGGGGC GCTGACCAGC
GGCATCACCG GGCTGGAGAC CGCCCTGGGC ATCCACGCCG GCGAGTCCTC GATGGAGGAG
GCGGTCTACG CGATGGAAAA GCTCATCCCG GCCATGGCCG CCGTCCGCGC CGCCGCCGAC
GAGCTCGAGG GCCTGGTGGC CGACGACACC TGGCCGCTGC CGACCTACCA GGAGATGCTG
CACATCCTGT AA
|
|---|
| Protein sequence | MSGSQSRRQA INAVTGYQVP DKDFTEPLGE LFGRNTFSPA VMKSRLPKSV YKSVMSTIDK
GTPLDPTVAD VVASAMKDWA LENGASHYAH VFYPLTGLTA EKHDSFLSPE DSGASMAEFA
GKTLIQGEPD ASSFPNGGIR NTFEARGYTG WDVTSPAYIL ENPNGNTLCI PTVFISWTGE
ALDKKTPLLR SQQAMSKQAA RVLTLFGHDD IDTVVSYAGA EQEYFLIDRH FYFSRPDLMS
SGRTLFGAKP AKGQQFDDHY FGAIPERVLA FMIEVDRELF KQGILAKTRH NEVAPGQFEI
APLFEKANLA HDHQQLMMTT LQRVAQRYGM ECLLHEKPFA GVNGSGKHVN FSIGNGNQGN
LLNPGDTPHE NVQFLVFCAA VIRGVHKYGG VLRAVVASAR NDHRLGANEA PPAIISIFLG
EQLADVFDQI AAGALTGSKP AGTLTLGVDT LPPFKADPGD RNRTSPFAFT GNRFEFRAPG
SSQSISGPMV AINTILADSL DYIATELEAL IEGGMEFDAA VQKVLKDIIT EHGAVVFNGD
GYADAWQVEA AERGLPNLKT TVDALPQFDR PEVKDLFEKY GVLSNRELAS RLEVYLEQYA
LSVMLEASET LEIAKTKILP AAIRYQGELA GAAMNLKAIG MSFDSPTLDA ITASVGALTS
GITGLETALG IHAGESSMEE AVYAMEKLIP AMAAVRAAAD ELEGLVADDT WPLPTYQEML
HIL
|
|---|
| |