Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | NSE_0967 |
Symbol | |
ID | 3931735 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Neorickettsia sennetsu str. Miyayama |
Kingdom | Bacteria |
Replicon accession | NC_007798 |
Strand | + |
Start bp | 853738 |
End bp | 855135 |
Gene Length | 1398 bp |
Protein Length | 465 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 637901121 |
Product | phage uncharacterized protein |
Protein accession | YP_506831 |
Protein GI | 88608556 |
COG category | [S] Function unknown |
COG ID | [COG5410] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR01630] phage uncharacterized protein (putative large terminase), C-terminal domain |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.451476 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGAAAAGAC AGTATTCCAC GGAGGAGTTT CTAAAATTCT TTAAAGAATC ATTTAAAACT CTTTTCCCTG CCAAAAAGTT CGTAAAGTGT GGATACATAA ATGTCATATC AGACAGATTG GTTGCCTGCT TAAACGGGAA AATCAATAGG TTGATAATCA ACATTCCTCC TAGACATATG AAATCCACCT TAGTTAGTGT TGTGTTCCCA GCTTTTGTTC TTTCAAAAGA ACCCTCAAAA GGAATAATAG TAGCAAGTTA TTCGAGCCTA CTAAGCACTA AACATTCACT CGAAACAAAA CTCGTTATGT CTTCTGAGTG GTACAAAAAA AAGTTCAAAG ACACTGTCAT ATCAAAACAT CACAACACAA AAAATAAATT TTTAACTACC AAGTTAGGAT TCCGGCTTGC AACATCAATT TCAGGAACAC TTACTGGAGA AGGAGCAGAC ATCATAGTAG CTGATGATCC AATAAATGCA CTACAGGCAA ACAGTAACAC ATTTAGAGAA AGGACAAAGA CTTGGTTCCT AAACACATTT ATGACACGCC TAAATCATAG TAAAAAGAGT ATAGTAATCA TTGTTATGCA GAGGCTTCAT TACGATGATA TATGTGGTCA CTTAACAAGA ACTTCGGACA AGTGGCATGT TATATCACTT CCACTTATTG CAGAGAGGAA AGAAAAAATT ACTTCTATAA ACTCAAAAAA GATTCTTTTA AAAAGGAAGG AAGGCGAAAT TTTAAATAGA AACTATTTAA AACACGAAAA TATACCAAAA CTGAAAGCAG AGATAGGCAC ATACGTTTTT GCCTCACAGT ACCAACAAAA TCCAATTTCA AATATAAACT CGATTATTAG AAGAGAGTGG ATAAAGCGTT ACTTAGAAAA AGAAGAGATA AGTGAAATAT TATATATATC TCAAAGCTGG GATACAGCAG CTTTTAATAC TCAACAGAGT GATTATACAG TCTGCATTAC ATTTGCGAGA TCGAAAACAG CATTTTATGT TTTAGACGTG TATAGAGAAA AACTAGATTA TCCTGAAATA AAAAGAGCAA TTGTTGAAAA CGCAGAGAAA TGGAAAGCAA ATTACGTTCT TATTGAGAAC AAATCAAGTG GACAAGCTTT AGTACAAGAG CTCAGAAGCT CAACAGCTCT ACCAATAGTT TCTGTTACCC CAGTTAGAAA AAAAATAGAA AGACTCTACA GTGTCGTTTC AATATTTGAA TCAGGGAAGT TCTATTTACC GTATTCCAGT GAATGGCTGA CAAATTTCGA ACTGGAGCTT TTTAGCTTTC CAGGATCGAT TTACGATGAC CAAATAGACA GTCTTACACA GTATTTGAAC TACGAAATTA CGAAAAGTTA TCCCCAATTG AGTATAAGAT TTCTCTAG
|
Protein sequence | MKRQYSTEEF LKFFKESFKT LFPAKKFVKC GYINVISDRL VACLNGKINR LIINIPPRHM KSTLVSVVFP AFVLSKEPSK GIIVASYSSL LSTKHSLETK LVMSSEWYKK KFKDTVISKH HNTKNKFLTT KLGFRLATSI SGTLTGEGAD IIVADDPINA LQANSNTFRE RTKTWFLNTF MTRLNHSKKS IVIIVMQRLH YDDICGHLTR TSDKWHVISL PLIAERKEKI TSINSKKILL KRKEGEILNR NYLKHENIPK LKAEIGTYVF ASQYQQNPIS NINSIIRREW IKRYLEKEEI SEILYISQSW DTAAFNTQQS DYTVCITFAR SKTAFYVLDV YREKLDYPEI KRAIVENAEK WKANYVLIEN KSSGQALVQE LRSSTALPIV SVTPVRKKIE RLYSVVSIFE SGKFYLPYSS EWLTNFELEL FSFPGSIYDD QIDSLTQYLN YEITKSYPQL SIRFL
|
| |