Gene NSE_0910 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNSE_0910 
Symbol 
ID3931861 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNeorickettsia sennetsu str. Miyayama 
KingdomBacteria 
Replicon accessionNC_007798 
Strand
Start bp808080 
End bp809132 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content40% 
IMG OID637901064 
ProductGTP-dependent nucleic acid-binding protein EngD 
Protein accessionYP_506775 
Protein GI88608807 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0012] Predicted GTPase, probable translation factor 
TIGRFAM ID[TIGR00092] GTP-binding protein YchF 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0422609 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCTTAA AGTGCGGAAT CGTCGGGCTT CCAAATGTTG GAAAGTCGAC ATTGTTTAAT 
GCGATGACGC AAACACAAGC AGCTGAAGCT GCAAACTATC CTTTTTGCAC AATAGAACCA
AACATTGCCA AGGTACCAGA ATATGACGAA CGTCTTGTTC AAATAGCCAA GATTTCATCG
GCACAAAAAA TTATATTCAG CCAATTGGAA ATCGTTGATA TCGCAGGGCT AGTTAAGGGA
GCAAATAAAG GTGAGGGATT AGGTAATAAA TTCCTTTCCC ACATAAGAGA AGTAGATCTC
ATAATACACG TGCTGAGATG TTTTCCAGAT AACAATATAA GACACGTTCA TGGAAAGGTA
GACCCTGTGT ACGATGCAGA AATCATAAAG ACTGAGCTGC TCCTCGCGGA CATTCAGAGT
CTGGAAAATC GTCTCAAAAA AAGTAAAGCC TCTAGTCAGA TAATAGAACA GGCTCTAGAG
ATATTAAATA AAAAAAATCC TCTTCCATAT GATCTAATGG ATCAAGCATT TAAAGAACTG
CATCTATTAA GTGCGAAGCC GGTTCTATAT GTGTGTAATG TCCCTCAAGA AGATATCGTC
TCAGGAAACA ATTTCAGCAA ACAAGCAGAA AAATTCGCAC AGGACAGCAT GTCTGAAGCA
GTTAAAGTTT CTGCAGCAAT AGAAGCGGAA ATCTCACTGT TAGAATCAGC AGAAGACCGC
AAACTTTTTT TGAATGAACT TGGCTTAGAA GAATCACAAT TGAATAAGGT AATCCGGGCA
AGTTCAAGGC TCCTCAACCT CATTGTCTTT TTCACTTCAG GAGAAAAAGA AGCAAGAGCC
TGGCCTATAA AAAGAGGTTC TACAGCGCCT CAGGCAGCTG GAACGATTCA TACAGACTTC
GAAAAAAAGT TTATTAAGGC TGAAACAATA AGCTTCACAG ACTATATCAC CTTCGGCGGT
GAGCAAAAAT GTAAAGCACT CGGCAAAATT CGTTCAGAGG GTCGCGAGTA CGTCGTACAA
GATGGAGATA TAATCCTTTT TAAACACGGG TAG
 
Protein sequence
MGLKCGIVGL PNVGKSTLFN AMTQTQAAEA ANYPFCTIEP NIAKVPEYDE RLVQIAKISS 
AQKIIFSQLE IVDIAGLVKG ANKGEGLGNK FLSHIREVDL IIHVLRCFPD NNIRHVHGKV
DPVYDAEIIK TELLLADIQS LENRLKKSKA SSQIIEQALE ILNKKNPLPY DLMDQAFKEL
HLLSAKPVLY VCNVPQEDIV SGNNFSKQAE KFAQDSMSEA VKVSAAIEAE ISLLESAEDR
KLFLNELGLE ESQLNKVIRA SSRLLNLIVF FTSGEKEARA WPIKRGSTAP QAAGTIHTDF
EKKFIKAETI SFTDYITFGG EQKCKALGKI RSEGREYVVQ DGDIILFKHG