Gene NSE_0872 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNSE_0872 
Symbol 
ID3931721 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNeorickettsia sennetsu str. Miyayama 
KingdomBacteria 
Replicon accessionNC_007798 
Strand
Start bp779288 
End bp780073 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content41% 
IMG OID637901027 
Producthypothetical protein 
Protein accessionYP_506739 
Protein GI88608271 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000107164 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATATTT TCAGATCTAT GATTTGGGCT TTACTGCTCG CTCTTCTGGG TGATTTTGCC 
AGCGCATCTC CTGCTGCTAA GTCTGGCACT AAATTTTATG TTGGTGCTAA CTACAACGCT
TTTGTAGCCG GTAAAATCAG TGGAGAGGAT ATACATAGGG ACATTAACAC AGAAAAAGCA
AAGCTCTTCT TCCCTGTAAC CAAGAAGAAA CTTATGGATA GCACACTTGA GAGTTTCGGT
GGTAAAATCG GATTTACCGT ATCGGGTCTC AGCGTAGAAG CAGAATGCCT ATATGGACGA
ACTGCCTCCT CAGGTTTATC AAGTCAAACC AATGATCCTG CACACAAAAC TAAGACTATC
TCAGCCAGTG ATGGAAAGAC TAATGGGGGA TATGTATACC TATTAGGGAT TCTAAATACC
AACTTGGAAT TCTCAGGGGT GACGTTATTC AGTCCTTACT TAAGCCTCGG GGTCGGGAGT
GGCAGCATAC TCATTGAAGG AGATGATGGG AATTATGGAT TTCCACTCGT AACACAACTA
AGAACAGGAT TAAAATCGGA TCTTGAATTA TTCTCACTAT CAGTAAAACC GTATTTTGGA
TACAGGTTAA TGCTTGTTTC AAGCATGTGC ACAGAAAGGC TGACTGATGT CCCCACAATA
GTTACAAGTC GTCTAGATAC AGGTCTAGGT ATTGTGGATA AAATAAAGGA AGCGGTGAGC
GTGATCCGTA GCATGAGTCA TGTTTCACAC AATATTGAAG CTGGTATAGC TTTCTATATG
CACTAA
 
Protein sequence
MNIFRSMIWA LLLALLGDFA SASPAAKSGT KFYVGANYNA FVAGKISGED IHRDINTEKA 
KLFFPVTKKK LMDSTLESFG GKIGFTVSGL SVEAECLYGR TASSGLSSQT NDPAHKTKTI
SASDGKTNGG YVYLLGILNT NLEFSGVTLF SPYLSLGVGS GSILIEGDDG NYGFPLVTQL
RTGLKSDLEL FSLSVKPYFG YRLMLVSSMC TERLTDVPTI VTSRLDTGLG IVDKIKEAVS
VIRSMSHVSH NIEAGIAFYM H