Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | NSE_0872 |
Symbol | |
ID | 3931721 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Neorickettsia sennetsu str. Miyayama |
Kingdom | Bacteria |
Replicon accession | NC_007798 |
Strand | + |
Start bp | 779288 |
End bp | 780073 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637901027 |
Product | hypothetical protein |
Protein accession | YP_506739 |
Protein GI | 88608271 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0000107164 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATATTT TCAGATCTAT GATTTGGGCT TTACTGCTCG CTCTTCTGGG TGATTTTGCC AGCGCATCTC CTGCTGCTAA GTCTGGCACT AAATTTTATG TTGGTGCTAA CTACAACGCT TTTGTAGCCG GTAAAATCAG TGGAGAGGAT ATACATAGGG ACATTAACAC AGAAAAAGCA AAGCTCTTCT TCCCTGTAAC CAAGAAGAAA CTTATGGATA GCACACTTGA GAGTTTCGGT GGTAAAATCG GATTTACCGT ATCGGGTCTC AGCGTAGAAG CAGAATGCCT ATATGGACGA ACTGCCTCCT CAGGTTTATC AAGTCAAACC AATGATCCTG CACACAAAAC TAAGACTATC TCAGCCAGTG ATGGAAAGAC TAATGGGGGA TATGTATACC TATTAGGGAT TCTAAATACC AACTTGGAAT TCTCAGGGGT GACGTTATTC AGTCCTTACT TAAGCCTCGG GGTCGGGAGT GGCAGCATAC TCATTGAAGG AGATGATGGG AATTATGGAT TTCCACTCGT AACACAACTA AGAACAGGAT TAAAATCGGA TCTTGAATTA TTCTCACTAT CAGTAAAACC GTATTTTGGA TACAGGTTAA TGCTTGTTTC AAGCATGTGC ACAGAAAGGC TGACTGATGT CCCCACAATA GTTACAAGTC GTCTAGATAC AGGTCTAGGT ATTGTGGATA AAATAAAGGA AGCGGTGAGC GTGATCCGTA GCATGAGTCA TGTTTCACAC AATATTGAAG CTGGTATAGC TTTCTATATG CACTAA
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Protein sequence | MNIFRSMIWA LLLALLGDFA SASPAAKSGT KFYVGANYNA FVAGKISGED IHRDINTEKA KLFFPVTKKK LMDSTLESFG GKIGFTVSGL SVEAECLYGR TASSGLSSQT NDPAHKTKTI SASDGKTNGG YVYLLGILNT NLEFSGVTLF SPYLSLGVGS GSILIEGDDG NYGFPLVTQL RTGLKSDLEL FSLSVKPYFG YRLMLVSSMC TERLTDVPTI VTSRLDTGLG IVDKIKEAVS VIRSMSHVSH NIEAGIAFYM H
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