| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NSE_0851 |
|---|
| Symbol | |
|---|
| ID | 3931835 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Neorickettsia sennetsu str. Miyayama |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007798 |
|---|
| Strand | - |
|---|
| Start bp | 753497 |
|---|
| End bp | 754156 |
|---|
| Gene Length | 660 bp |
|---|
| Protein Length | 219 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 637901006 |
|---|
| Product | peptidyl-prolyl cis-trans isomerase, cyclophilin-type |
|---|
| Protein accession | YP_506718 |
|---|
| Protein GI | 88608333 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.695557 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGAGGG CCAGTGTCAC AACTATTACT GCGTTTGTTC TGTTCTTTTG TGGTGTTTGT
TGCTCACATG CCTCTGTGGT ATTCCTGCAG TCTCAAGAAG GTGTATTATC ATATCCTGAG
CACGTGAGTT TTAATAAGAT TCAGCAAATG AAAGAGAAGA ATGCAAATCC CGTAGTAGGT
CTCGAGATAG GTGCTGGTGC TGAGATGTTG GGTGAGATAG AGATTGAGCT CGCAGCAGAT
GTGGTACCTA GAACTGCAGA AAACTTTCTT CAACTCTGTA CTGGTAAGAA TGGGTTCGGC
TACAAAGGTT CTATATTTCA TAGGATAATA CCTTCCTTCA TGATACAAGG CGGTGACTTT
ACTCAGGGTA ATGGTACAGG TGGCCACTCG ATATACAACA ATGATGTTTT TCCCGATGAA
AACTTTGTCA TAAAACACAC TGGTCCCGGA AAGGTCTCAA TGGCCAACCG TGGTCCGAAT
ACCAATGGAT CACAATTCTT TATTACTACA GTAGAGACCC CCTGGTTGGA TGGTAAACAC
GTTGTTTTTG GACAGGTTAT TAGGGGAATG TCAGTTGTGA AAAAAATAGA AAGTTATGGT
TCCAGCAACG GGAGACCATC AAGAATTATA AAGATATTGG ATTGTTGGCA GGTGTCGTAG
|
|---|
| Protein sequence | MMRASVTTIT AFVLFFCGVC CSHASVVFLQ SQEGVLSYPE HVSFNKIQQM KEKNANPVVG
LEIGAGAEML GEIEIELAAD VVPRTAENFL QLCTGKNGFG YKGSIFHRII PSFMIQGGDF
TQGNGTGGHS IYNNDVFPDE NFVIKHTGPG KVSMANRGPN TNGSQFFITT VETPWLDGKH
VVFGQVIRGM SVVKKIESYG SSNGRPSRII KILDCWQVS
|
|---|
| |