| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NSE_0766 |
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| Symbol | virB4-1 |
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| ID | 3932022 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Neorickettsia sennetsu str. Miyayama |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007798 |
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| Strand | - |
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| Start bp | 683112 |
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| End bp | 685364 |
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| Gene Length | 2253 bp |
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| Protein Length | 750 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637900922 |
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| Product | type IV secretion system protein VirB4 |
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| Protein accession | YP_506641 |
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| Protein GI | 88608288 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3451] Type IV secretory pathway, VirB4 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTAAGTG ATTTGTATAC GAAGGAAGTC TCGCGGAATG TTCAGGCCTC TTGTTTTTAC
GACTCGAGCA GCGTTTTGAA TGCGAATGGT ACTCTGGTAA GGGTGGTGAA GCTATCGGAC
TTTAGGTTCA CCACATCTTC TTTGGAGAGG ATGCGTTCTT TGTGCAAAAA GGTCCTTTAC
TCGGGTGAAT TCAGGTGTTT AGGTCTCTGG ATCAATGTGG TACGCTCGCC TATTGGTTCT
GTTCGTGCTG AGAATGTGAG TATGGACGGA TTCGCAGCGG GTCTATCTGA TACCTACCAT
AAATTTGTGG AAAAAGAGAA TAGATTTTCA AACGAGGTAT TCATATCGAT TGTATCGGAG
TCAGCTCTTG AGTGTGCAGT CGGGCAGGTC GACTTTCTGC TTAGGAGTCT GCTAAAGAGG
TTTGATGAGT TTGCCTCCAA GGTAATCGTA AAAAGTTTGG AAGATGCGGT TGCAGTGGTT
TGTACGGAAT TGGCAGAATA CCAGCCCGTG CTGCTCTGTG AAGCAGAGGT AATGAATTTT
CTTTCCGCAT TACTTGGGAT TTCAAAAACC GGTCTCGAGA GTGGTGTTAG AGATATATCA
ACAGAACTAC TTTCTGATAG AAAGGTGTTT TTCGGTTTTA ATACTTTTGA GATACATGGA
GACAAAAGGA CTTTTGGTAC GAGCTTTTCG GTAAAGAGTT TTAGGAACCT TGAGGATGTT
CAGTTTGTAG CGAGGTTTCT GGGCGCCCAA AACAGGATGG TAATCACAGA AGTCATAACA
AGGACTACGG AAGAGGATAT TAGAGATACC TTTGAGGAAA GTCTTGAACT AACAGGGGTT
GTGAATGATA CGGCTTATCA AAGTGCTTCT TCTAAAGATA TTATCGCGGA GCATATAAAT
GAGAAGAGGA AGGAAGAGTT CTGTAAGCGC TCCTTCAAGG TGACACTTTT TGCAGATTCT
TTAGAGGAGC TTGGTCTTGT TGTTGCAAAT TGTGAAAAGC TTTTCTCACA TCGAGGTTTC
ATGATTGTAC GTGACGACCT GCTTTTAGAA GACACTTTCT GGGGTAACTT GCCCGGAAAT
TTCTCTAGAA TGAGAAAATG GGAGATAGTC TTACTGAAGG AAATCAGTTC ATTTGCCTTT
ACGCATGCGC ATTTTCGTTC TCTTTTGGCT GATGTGAATA AATGTCTTAC CAAATTTGTT
TCCCTTGAAG GAGAGTTGCA CTACTTTAGT TTTCCTGACG CTAAAAGCAA GAGCCACGCT
ATTATCTTTG GTAAAGAGAA ATCTAGTAGG ATCGAGCTGC AAAATTTTCT CTTATTAGAG
TCGGTTGTGA GGCTCGGTGC TGAGTTTTTA ATAGTGGATG ATCAGAGTCT TTCAGAAGTA
TTTGTACATG CGTTGGAAGG TTCATACATA GAGGTTTCAG ATGGGGCATT TAGGTGCAAC
TTGCTCGACG TAGCAGATGT TGATGTTTTA TATGATATTC TGTCGTCATT CTGTTCCAAA
GACGTCAAAA GCGAGGAAAT TGCAGGAGTA GCGAAAAAGA TATCTGAAAT TCCGCTAGGT
AAAAGAAGTC TGACTGACTG TGCTGTGCAT CTTCAGCCTA TTTTTGGGGA GCTTTCAATA
TTGCAAAAAA GTTATGGACA CCTTTTTACC AGTGACGCCG AAAATGGCTG GTTACTTGAG
GACAAACTTG GTTTTTCAGT AGATAAGTTA TCTTTGCCTG AAAAAGTTAT TTCCTCTGTC
ACGTCTTACG TGATTGCAAG GTACATTGAA GTGCGCAAGA AATCCGGTAA GCCGTTTATA
ATTGTGATAC AGAGCCCGAC TCGTTTTAAG AGGCTCTTTT CTTCGTTGTC AAAGTGCGAG
TCGTTTTTGT GTGAAGTGAG TGAATGCGGT GGTATGATTC TGTTCTCATC TGAGAACACA
GCTTTTCTCG AAAAGTTGGG TGAAGTAGGG ACAAAGTACA TCACCACGAG GATGTTTTTG
CCATTAAGTG ATACTTTGCC AGTAGAGTAT AATAAATTTT TTACTAGCTC TGCTTCTGTC
ATGCGTACAC TTGATGATGC ATCTCTTTTC GGAAAATGTT TCTTCCTTAA TCAAGGTGGT
AACTCTGTAA TTCTTAAGTT TGATTCTTTG TTATTTGAGG AGATGAAAAT TTTGTCATCT
TGTGGAAGAA TTGAGAAAAT GAGGGCTGCC ATGCGGGAAG CAGGCAATAA TCCCGCTATT
TGGTTACCGA TATTTTGCCG CGAATGCAAC TGA
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| Protein sequence | MVSDLYTKEV SRNVQASCFY DSSSVLNANG TLVRVVKLSD FRFTTSSLER MRSLCKKVLY
SGEFRCLGLW INVVRSPIGS VRAENVSMDG FAAGLSDTYH KFVEKENRFS NEVFISIVSE
SALECAVGQV DFLLRSLLKR FDEFASKVIV KSLEDAVAVV CTELAEYQPV LLCEAEVMNF
LSALLGISKT GLESGVRDIS TELLSDRKVF FGFNTFEIHG DKRTFGTSFS VKSFRNLEDV
QFVARFLGAQ NRMVITEVIT RTTEEDIRDT FEESLELTGV VNDTAYQSAS SKDIIAEHIN
EKRKEEFCKR SFKVTLFADS LEELGLVVAN CEKLFSHRGF MIVRDDLLLE DTFWGNLPGN
FSRMRKWEIV LLKEISSFAF THAHFRSLLA DVNKCLTKFV SLEGELHYFS FPDAKSKSHA
IIFGKEKSSR IELQNFLLLE SVVRLGAEFL IVDDQSLSEV FVHALEGSYI EVSDGAFRCN
LLDVADVDVL YDILSSFCSK DVKSEEIAGV AKKISEIPLG KRSLTDCAVH LQPIFGELSI
LQKSYGHLFT SDAENGWLLE DKLGFSVDKL SLPEKVISSV TSYVIARYIE VRKKSGKPFI
IVIQSPTRFK RLFSSLSKCE SFLCEVSECG GMILFSSENT AFLEKLGEVG TKYITTRMFL
PLSDTLPVEY NKFFTSSASV MRTLDDASLF GKCFFLNQGG NSVILKFDSL LFEEMKILSS
CGRIEKMRAA MREAGNNPAI WLPIFCRECN
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