Gene NSE_0601 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNSE_0601 
Symbol 
ID3931466 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNeorickettsia sennetsu str. Miyayama 
KingdomBacteria 
Replicon accessionNC_007798 
Strand
Start bp523005 
End bp523976 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content38% 
IMG OID637900757 
Producthypothetical protein 
Protein accessionYP_506481 
Protein GI88608244 
COG category[S] Function unknown 
COG ID[COG1565] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.434393 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGATCTT ATATAGAGAA TTTTATTAGA GGAAATGGAT CTATCTCATT CTCAAAATTT 
ATTGAGTTGA GCATGTACCA TCCGAGCAAA GGGTACTATA TGACAAGAAA CCCAATAGGT
AAAAGTGGGG ATTACATTAC TGCACCAGAG ATCTCGTCTC TTTTTGGAAA GACGATTGCA
GTGTGGATCC TTGAACAGTG GGAAAAGTTA GGAAAACCAG GTGAAATTGT ACTAGCAGAA
CTTGGTCCTG GGAGCGGAAT GATGATGTTT GATATTCTTA ATACCATAAG GAATATTGAG
CCTTTCTATG ATGCAGTTAC TGTTCATATG GTAGAGATAA GCCCGTTTCT CAGAGGTGTA
CAGATGGAAA ATTTACGTCC TCATAGCTGT AAGACTCGGT GGTGTAAGAG TGTAGATGAG
CTTCCGAACG GTAAACTGCT TGTTCTGGCA AACGAGTTTT TTGATGCACT TCCAATAGAC
CAATTTATTT TTTGGGGTGG AAATTTTTTT GAACGGAAAA TAACGGAGGA TTTTCAAGTA
GAGGAAGAAA AAACTCAAAA AAAATTTAGT GGAGAATTTA AAGATGGAGA TATAGTTGAG
ATAAGTTTGC TTGGGAAGCA GATCGCCTCG TCAATACTTG CTAGAATTGC GAAAGACGGG
GGAGGTGGAC TCATAATAGA TTATGGGCAC GCTACCCGCA CACGAAGAAG TACAGTACAG
GCAGTTAAGG GACATAGATT TATCGATATT TTTGAAAGTA TAGGCGAATC AGATATAACC
CATGAAATTG ATTTTTCTTA CTTATTTCCG AGGGCCAAAT TAATGACACA AGGAGATTTT
TTATCCCTCT ACGGTATATT TGAGTTTGCG AAGAGGTTTT CCGCTACCGA CACTGGAATA
CTTGAGCAAA CTTTATCTAG GCTTGTAGAT AAGGGAAAAA TGGGCAGATT ATTTAAGTGT
GCAATAATTT AA
 
Protein sequence
MRSYIENFIR GNGSISFSKF IELSMYHPSK GYYMTRNPIG KSGDYITAPE ISSLFGKTIA 
VWILEQWEKL GKPGEIVLAE LGPGSGMMMF DILNTIRNIE PFYDAVTVHM VEISPFLRGV
QMENLRPHSC KTRWCKSVDE LPNGKLLVLA NEFFDALPID QFIFWGGNFF ERKITEDFQV
EEEKTQKKFS GEFKDGDIVE ISLLGKQIAS SILARIAKDG GGGLIIDYGH ATRTRRSTVQ
AVKGHRFIDI FESIGESDIT HEIDFSYLFP RAKLMTQGDF LSLYGIFEFA KRFSATDTGI
LEQTLSRLVD KGKMGRLFKC AII