| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NSE_0493 |
|---|
| Symbol | pqqC |
|---|
| ID | 3932183 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Neorickettsia sennetsu str. Miyayama |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007798 |
|---|
| Strand | - |
|---|
| Start bp | 406532 |
|---|
| End bp | 407230 |
|---|
| Gene Length | 699 bp |
|---|
| Protein Length | 232 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 637900649 |
|---|
| Product | coenzyme PQQ synthesis protein C |
|---|
| Protein accession | YP_506377 |
|---|
| Protein GI | 88608653 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG5424] Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGTGTTTTA CTTCTGCTTG TACTTTTTTC CGTCTTCCAA TGTTTGCAAG AGAACTAGAA
CCTAAATCCC TCCTTAGACA CTGCTTTTAT AAAGCTTGGG AGAGAGGTGA ATTATCTAAA
AGAGATCTAC AGGAGTACGC TTGCCAGTAC TTTAACCACG TCAATGAAAC ACCTAGGTAC
CTTAGTACTC TTCATTCAAA ATGTTCGGAT ATAAAGACCA GGCAGGTGTT ACTTGATAAC
TTAATTGATG AAGAAAAGGG AGAAGAAAAT CACCCAAAGT TGTGGTTAGA TTTTTGTTCC
TTCATCGGAC TGGAGAGCGA GAAAGCCAAA AATGCAAAGT TGCTTGAAAC AACCAGGGAC
TTAAGTAACA CATTCTTTAG ATTATCAAAT AGCTCTGTAG CTGAAGGTAT AGGCGCACTT
TATGCATATG AAAGACAGAT TCCTGAAATA GCACGTGTAA AGATAGCCAG TCTGAAGAAA
TTCCATTCTG TGAATGATGA AAAGGCGCTA AAGTTCTTTT CCGTGCATGA AGAAGCCGAC
AAGTGGCACT CTCAAGAATG TGAAGATCTT ATCAAAGAAA TGAACGAACA CGATAGAGAG
AAAGCAAGAA AAGGAGCTCT TGAGCTTGCT TCCGCTTTGT GGGGATTTCT AGATGGAATG
GAAGAAATCA GGTTAAAAGG TGGACATCTG AACGTGTGA
|
|---|
| Protein sequence | MCFTSACTFF RLPMFARELE PKSLLRHCFY KAWERGELSK RDLQEYACQY FNHVNETPRY
LSTLHSKCSD IKTRQVLLDN LIDEEKGEEN HPKLWLDFCS FIGLESEKAK NAKLLETTRD
LSNTFFRLSN SSVAEGIGAL YAYERQIPEI ARVKIASLKK FHSVNDEKAL KFFSVHEEAD
KWHSQECEDL IKEMNEHDRE KARKGALELA SALWGFLDGM EEIRLKGGHL NV
|
|---|
| |