| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NSE_0463 |
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| Symbol | lpdA-1 |
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| ID | 3932249 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Neorickettsia sennetsu str. Miyayama |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007798 |
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| Strand | + |
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| Start bp | 378409 |
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| End bp | 379782 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637900619 |
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| Product | dihydrolipoamide dehydrogenase |
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| Protein accession | YP_506348 |
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| Protein GI | 88608597 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
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| TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTACGATG TTATAGTAGT TGGTGGTGGT CCGGCCGGGT ATCCTGCAGC GATTCGGGCG
AGTAGGAGTG GTCTTAAGGT TGCGCTTGTT GAAAAAAATA AGTTGGGAGG GGTGTGCCTC
AATTGCGGGT GTATCCCAAC TAAAGCTCTT TTGCACATTG CAGAGAAGTA CCATTTTGTA
AAAACTGGAG CAGCTGAGCT AGGTATAAAT GTTTCCAATG TTTTTCTTAC CTTTAGTAGT
GCTATCGCGT ATGCTCAAGA GAAAATTAAA AAACTTGCTG CTGGTGTTTC CTACCTTATG
AAGAAAAATA AGGTAGAGCT TTTTTATTCT AGTGGAAGAA TTTTGCCTGG TAAGCAAGTC
AAGTTAGAGG ATTTAGGTAA GACTATAAGT GCAAAAAACA TTATTCTCGC AACCGGGAGC
ACTCCAAAAG AGATTACGGG TCTGGAATAT GACCATGAGC TGATTTGGAA TTACAATGAT
GCAATGACGG CAACTAAAAT GCCTAAATCG TTGTTGGTAG TTGGAGCTGG CGCGATAGGT
GTTGAATTTG CGTGCATTTA TAATGTTTTT GGTAGTAAGG TGACGGTCAT AGAAATGCAG
AACCAGATCC TTCCAGCTGA GGATACTGAA ATCAGTAATC TTGCCGAAGC TGCGTTTAAA
GAAAGTGGAA TCACTATACG GAAAGGTACT ACTATTCAGT CCTTAAAGAA GGATAAAGAT
AAGGTTCTTG TAACATTAAG CGACGGAACT AACCTAGAGG TTGAAAGAAT TTTGGTTGCA
GGTGGCGTAG AGGCGAGCTC TCAGAATCTT GGTCTTGAAC AGATTCCTAC GATAAGGATG
AATAAGGGTT TTGTTTCTGT TGACAAGTAC TGTGAAACAG GCGAGCCTGG TGTATACGCA
ATTGGTGACT TAAGGGGCTT TCCTTGTGTC GCTCACAAGG CAATATATGA TGCGTATGTT
TGTACGGCAA AGATAGCGGG AAAAGAACCT GTTCCTCTAG AAATGGATAG TATTCCTAGT
TGTATTTATT CCTTTCCTTC AATTGCAAGT GTTGGTTTGA CAGAAGAGGC CGCTATAAGA
ATGGGTCATA AAGTGAAAAT AGGCCGTGCA AAAGCTGAAG GAAACGGAAA GTCAGTTGTA
CTTGGTAAGG ATAAAGGTTT GGTCAAAACA GTCTTTGATG CCAAAACAGG GGAACTTCTG
GGAGCACACA TAATTGGTTA TGAAGCTACG GAGATTCTGA ATGGTTACAT TATTGCAAAA
GCCTCGGAGG CAACTGTTGA AAGCCTGAAG GCTGTTGTTT TTCCCCACCC AACTATTTCT
GAGATGATGT ATGAGGCAGT ACTAGCAGCG GACAATGAGG AAGTCCATTC GTAA
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| Protein sequence | MYDVIVVGGG PAGYPAAIRA SRSGLKVALV EKNKLGGVCL NCGCIPTKAL LHIAEKYHFV
KTGAAELGIN VSNVFLTFSS AIAYAQEKIK KLAAGVSYLM KKNKVELFYS SGRILPGKQV
KLEDLGKTIS AKNIILATGS TPKEITGLEY DHELIWNYND AMTATKMPKS LLVVGAGAIG
VEFACIYNVF GSKVTVIEMQ NQILPAEDTE ISNLAEAAFK ESGITIRKGT TIQSLKKDKD
KVLVTLSDGT NLEVERILVA GGVEASSQNL GLEQIPTIRM NKGFVSVDKY CETGEPGVYA
IGDLRGFPCV AHKAIYDAYV CTAKIAGKEP VPLEMDSIPS CIYSFPSIAS VGLTEEAAIR
MGHKVKIGRA KAEGNGKSVV LGKDKGLVKT VFDAKTGELL GAHIIGYEAT EILNGYIIAK
ASEATVESLK AVVFPHPTIS EMMYEAVLAA DNEEVHS
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