| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NSE_0408 |
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| Symbol | rpsA |
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| ID | 3932255 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Neorickettsia sennetsu str. Miyayama |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007798 |
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| Strand | + |
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| Start bp | 331727 |
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| End bp | 333388 |
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| Gene Length | 1662 bp |
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| Protein Length | 553 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637900564 |
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| Product | ribosomal protein S1 |
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| Protein accession | YP_506295 |
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| Protein GI | 88608293 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0539] Ribosomal protein S1 |
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| TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.460478 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAAAC AGCAGTTTTA CATTACCACC AATAAAGCAT CTGAGAGAAG GTTTTACTCA
GAGGTTCCAG ATTACAACGA GGAGGACTTC ACCACAATTC TTGAGGAACG ATTTTCGGAC
TCTCTGATAA GAGAGGGTGA CATGGTTGAA GGTGTGATTA AGTCTATAAG TCCGCATTTT
GTTTTGGTAA ATCTGGGTCT TAAGTCAGAG GGAAAAATTC CTGTTCAGCA GTTCCATGAT
TTAGGCACAC TAGAGGTGGG TTCTAAGATT ATCGTATATG TTGAAAAAAC AGAGACTGGT
AGTGGTAACC TTGTTTTAAG TTATACCAAA GCACTGAAAC AAAAAGTCTG GAATAGACTT
TATGAAATGT ATCTCAATGG GTCTGATGAA GATGTAATGG GAGTCATCCT ATATACGATC
AAAAGCGGCT GCATTGTTGA AGTTGAGGGG CTGAATGCGT TTCTACCAAA TAGTCACCTA
GACGTGAGGC CGGTCTCTGA TCCGGCAACT CTCGTGGGAG TAAAATTAAA GTTCAGGATT
CTGAAGATGG ATCCGAAAAC AGGAAAGATT TTTGTTTCGA GGAGAAAAGC ACTTGGTGCA
GTACATGAGG CTGCTCGTTC AGAGTATATT TCGACGATTA AAGAAGGTGA CATCATTGAT
GGTCGTGTCA AGAGTATCGC GAGTTATGGT GTTTTTGTAC AAATACACGA GTCTGACAAA
GTCGGCGTTG TTGATGGTCT TCTTTACGTA AACGATATTT CGTGGGCACG AGTTACTCAT
CCGTCTTCGA TCTATTCTGT TGGGCAAGAG GTACGTGTGA AGGTGATTGC TGTGGATCCA
GAAAAGGGGC GTATATCACT TGGTGTGAAG CAGCTTACGG AGAATCCTTG GAAGGATGTC
TCTAAGAAAT ATACTCCGGG GAACGTATAT CCTGGGGTTG TTACTTCTGT TGAGGATTAC
GGTATTTTCG TCAGGTTGGA AGAGGGCGTA GAAGGGTTGG TGCATAGCGG TGAAATATCT
TGGACCAGGG AAAAGCCATT GTTCTTACCT AACAGCAAGG TGAACGTTAT GCTTCTCTCA
GTTGATGAAG AAGGTCATAA AATTGCGCTT AGTGTGAAGC AATGTAGTGA CAACCCGTGG
AAGAAGTTCT TGGATGCTTA CGGGCTCGGT GTTGTAGTGA AATGTAAAGT TGTCGAGATA
ACTGACTCTG GAATAGTGCT GACACTTCTT GATCCCGGAT ATTCTTATGT CAGAGGATAT
GTAAGGCTTG CGAACATTAG TTGGTCGCAA AATCCTAGAA AGGAATTGAA GCGTTTCACT
ATCGGTGACG AAGTGGAGGC AAAGCTAGTA CATGTTAATC CCGATCGTGG TCGTGTGATG
TTTAACATCA AGTATGTTGA GTACGATCCT TTCGAGGAAT TCATCTCTAG AGTGAACGAA
AAAGATATAA TTAATGCAAA AGTAATACGA GTAGAGGATG ATGGCATTTA TATCGAGGTT
AGAGAAGGTT TGGAGTTCTT TACAGCGCAG TCTGATGTAA GTCGTCTTAC TGTAGGACAG
CACCTTTCCT TTGTTGTTTG TAGTAAAGAT CATTATTCAG TTAAGCTGGA GATTATCACA
GACGAGAAGG CTGGTGGGGC TCCTGCTGGA GAAGAGAAGT GA
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| Protein sequence | MNKQQFYITT NKASERRFYS EVPDYNEEDF TTILEERFSD SLIREGDMVE GVIKSISPHF
VLVNLGLKSE GKIPVQQFHD LGTLEVGSKI IVYVEKTETG SGNLVLSYTK ALKQKVWNRL
YEMYLNGSDE DVMGVILYTI KSGCIVEVEG LNAFLPNSHL DVRPVSDPAT LVGVKLKFRI
LKMDPKTGKI FVSRRKALGA VHEAARSEYI STIKEGDIID GRVKSIASYG VFVQIHESDK
VGVVDGLLYV NDISWARVTH PSSIYSVGQE VRVKVIAVDP EKGRISLGVK QLTENPWKDV
SKKYTPGNVY PGVVTSVEDY GIFVRLEEGV EGLVHSGEIS WTREKPLFLP NSKVNVMLLS
VDEEGHKIAL SVKQCSDNPW KKFLDAYGLG VVVKCKVVEI TDSGIVLTLL DPGYSYVRGY
VRLANISWSQ NPRKELKRFT IGDEVEAKLV HVNPDRGRVM FNIKYVEYDP FEEFISRVNE
KDIINAKVIR VEDDGIYIEV REGLEFFTAQ SDVSRLTVGQ HLSFVVCSKD HYSVKLEIIT
DEKAGGAPAG EEK
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