| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NSE_0313 |
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| Symbol | clpA |
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| ID | 3932210 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Neorickettsia sennetsu str. Miyayama |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007798 |
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| Strand | - |
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| Start bp | 256575 |
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| End bp | 258797 |
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| Gene Length | 2223 bp |
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| Protein Length | 740 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637900469 |
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| Product | ATP-dependent Clp protease, ATP-binding subunit ClpA |
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| Protein accession | YP_506203 |
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| Protein GI | 88608467 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCTCGC CTAGTTTAGA GAATACGCTT CAGAACGCGC TCGTTTTGGC ACGGAGTTTT
TCGCATTCTT ACGTCACACT GGAACATCTT CTTCTTGCCC TCACGGATGA CGAAGAAGTT
TCGAGAATCG CCTTCAACTC AAGCATGAAT TTTGCCAAAC TAAGGGATTC GCTTATTCAT
TTTCTTAGCA CAGCAAAGTT TTTCGCACGC CTTTCCAATG AATGTGTCGA TATAAGCAAA
ATCAAACCAA CACTTGGATT AAGACGCGTC ATACAGAGAA GCAAAATTCA TGCAAACATA
GCGGAATTTG GACAAATCAC AGGTCTACAT GTTTTGATCG AACTGTTCTG TGAACAAGAT
TCCTATGCAT TCTCGTTTCT CACAGAAAGC AATATAACAC TTACAGAGCT CATGTCTCAC
GTGATGAAGT CCCGTAAAGG GTCCCCAACT GGAGGTACAT CTACTGCAAA TACGGATGCA
CTCAGAAGTG CAGAACTTGA TAATTTAAAG GAATACTGCA CGGACATGAA TGAGCTAGCT
ATTCAAGGAA GGATAGACAA ACTCATTGAT AGAAAAAAGG AAATTGAGAG AACAATAGAG
ATTCTTTTAC GGAGAACCAA AAACAATCCT ATTTACGTCG GTGAACCTGG GGTTGGAAAG
ACCGCCATAG TAGAAGGCTT GGTACATGCG ATAGTCAGTG GTAACGTCCC ACAGAAGCTG
AGAAATACAC GTGTGTATGC ACTCAAGATA GGCTCTTTAC TCGCAGGTAC ACGCTATAGG
GGTGATTTTG AAGAGCGTAT TAGAACAGTC ATGAACGAAA TATCCAGTAG TAAGAATACA
ATACTTTTTA TAGATGAAAT CCACACAATC GTCGGTGCTG GCTCAACAAG TAATGGCTCT
ATTGATGCAG GAAATCTTCT AAAGCCATTT CTGACAAAGG GTCCTCTCAG GTGTATTGGC
GCTACGACCT ATAGAGAATA CTCCACACAC TTTGAAAAAG ATGCAGCACT TGATAGGAGA
TTTCAGCGGA TAGAAATAGA GGAACCATCT ATAAGTGACA CTCTAAATAT AATTGACGGG
ACAAAGTCAT ATTACGAGGA TTTTCACAGG GTGCATTATA CGAAGGCATC CCTTAATGAG
ATAGTAAATC TAGCCCACAG ATACATACCA AACAGAGCCT TCCCCGATAA AGCTATAGAT
TTAATGGATG ATTTGGGTGC ATCATACAAT GCGGAGTTAT TCGATATCAA AAAAAGGCGC
GATAGAAAAA TAGATATTAA GTATGTCAGG GAAACGCTTG CAAAGCGTTT TAATATTCCG
CTTGCACAGT TAAATTATAC CGTGGAGGAA GTATTAACTT CCCTTGAGAG AAACCTTAAG
GCAGAAATTT TCGATCAAGA CAATATCATA GAGCAGGTCA TCTATTCGCT GAGACCTGGG
CTACTTGGAT TAAAAGGTGA AAAACCTTTG GCTTCGTACC TATTTGGGGG TTCTACGGGT
GTCGGCAAAA CAGAGCTTGC TAAACAAATT GCCAAAAACT TGTGCATGCG GTTTGTGAGA
ATTGATATGT CCGAATATAT GGAAGGCCAC GCTGTCTCAA GATTGATAGG TGCACCTCCA
GGATACGTGG GACATGATAA GGGAAGCTTT ATAGCTGAGA TACTTTTTAA ACAAGGCAGT
TCACTTATCC TGTTTGATGA AATAGAAAAG GCACATGCTG ATTTTCAAAA CATTCTCCTT
CAGATTCTTG ATTATGGCTG CATAACGGAT AGCACTGGGA AAAAGAGTAG GTTCAAAAAC
TGCATAATGG CCTGCACGAC AAACGTTGGA AGTACTTTTA TTGAGAATAA TTCTCTTGGT
TTTACTCAAG ATGGCAAGAA AACCGATAAG AAAGCTCAAT TTGCAAGTTT TTTCAACAAA
GAACTACTTG ATAGATTCGA TCTTGCAATA GTCTTCAATA CACTTGACAA AAATAGCGTG
GAAAAAATAA TAAATAAGTC TGCAACTGAA ATTCGTGCTC TCCTTGAAGA AAAAGGAATT
AAGCTTAAGC TTACAGATGA AGTAGTAAAG TTACTAGTTG CAAGGCACTC ATCTGGTAAA
ATAAGTGCCA GAACTATAGA AAGGACCATC AGGAATGATA TAATGCAGGC GGTTTCGGAT
AGGATGTTGC GTTCTAAAGC TAGCGAAATA GAGTTGACCA TCAAGGACGG CTGTTTGGTG
TAG
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| Protein sequence | MISPSLENTL QNALVLARSF SHSYVTLEHL LLALTDDEEV SRIAFNSSMN FAKLRDSLIH
FLSTAKFFAR LSNECVDISK IKPTLGLRRV IQRSKIHANI AEFGQITGLH VLIELFCEQD
SYAFSFLTES NITLTELMSH VMKSRKGSPT GGTSTANTDA LRSAELDNLK EYCTDMNELA
IQGRIDKLID RKKEIERTIE ILLRRTKNNP IYVGEPGVGK TAIVEGLVHA IVSGNVPQKL
RNTRVYALKI GSLLAGTRYR GDFEERIRTV MNEISSSKNT ILFIDEIHTI VGAGSTSNGS
IDAGNLLKPF LTKGPLRCIG ATTYREYSTH FEKDAALDRR FQRIEIEEPS ISDTLNIIDG
TKSYYEDFHR VHYTKASLNE IVNLAHRYIP NRAFPDKAID LMDDLGASYN AELFDIKKRR
DRKIDIKYVR ETLAKRFNIP LAQLNYTVEE VLTSLERNLK AEIFDQDNII EQVIYSLRPG
LLGLKGEKPL ASYLFGGSTG VGKTELAKQI AKNLCMRFVR IDMSEYMEGH AVSRLIGAPP
GYVGHDKGSF IAEILFKQGS SLILFDEIEK AHADFQNILL QILDYGCITD STGKKSRFKN
CIMACTTNVG STFIENNSLG FTQDGKKTDK KAQFASFFNK ELLDRFDLAI VFNTLDKNSV
EKIINKSATE IRALLEEKGI KLKLTDEVVK LLVARHSSGK ISARTIERTI RNDIMQAVSD
RMLRSKASEI ELTIKDGCLV
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