| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NSE_0298 |
|---|
| Symbol | |
|---|
| ID | 3932226 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Neorickettsia sennetsu str. Miyayama |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007798 |
|---|
| Strand | - |
|---|
| Start bp | 241778 |
|---|
| End bp | 243559 |
|---|
| Gene Length | 1782 bp |
|---|
| Protein Length | 593 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 637900454 |
|---|
| Product | putative chaperone protein HscA |
|---|
| Protein accession | YP_506188 |
|---|
| Protein GI | 88608318 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0443] Molecular chaperone |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGTGA TAACAATCAA TGAGCCAAGA CAAAAACTTG ATCGTGAAGT CATCATAGGT
ATAGACTTTG GAACGACCAA TTCTCTTGTT TGTATATTCG ACGGTAGCAA ATGCGTTGTT
ATTCCTCAAG AGGGTGGCGA CGTCCTTCTT CCATCTGTTA TTGGTGTGAA AGACAAGGAC
ATCATTATTG GAAAGGAAGC AAAGAAATGT AGGGGTCACA TTCTATCGAT AAAGAGGATA
ATCGCAAAAA AAGCAGGTAT ACCAGGAAGC ATACGAAACA ATCCGCAGGA GATGTGCACT
CTCTCAATAG GATATGCGTC CAGAATTTTT GCATCTCTAA AAAGAACAGC TGAAAAATAT
CTTGGACACT GTGTGAACAT GGCTGTGGTC ACAGTTCCGG CATATTTTGA TAACGCTTCC
CGCACGGCAA TTAAGGATGC GGCAACGATT GCCGGGCTAA ATGTAGTGCG TCTGTTAAGT
GAACCAACTG CAGCAGCACT TTTCTACGGA ATTGACGAGA AAAAAGAAGA AGGCAGATAT
ATCGTCTACG ACTTAGGTGG TGGAACTTTT GATGTTTCAA TTTTGGAATT TCACAAAGGC
ATTTTTAAGG TTTCCTGTAC CGATGGTGAT GATTACCTTG GTGGTGATAA CTTTGATCAG
GCACTGTTAG AACATCTCCT GAAAAAATAT GCACTTGAAC CCACGGATGA GGAAAAAGCT
GCCCTGCTAG TGGTTTGCAT AAAGATCAAG GAGGAGTTGA GTCACCAAAA TAGGGTAACA
AACTACCTTG ACTATCGGGG ACAAAACCTA TGTTTTGAAA TCACATTGGA TGAATTTGAA
AAAATAATAG AAAAGGATGT AGAGAAAACA ATCAACATAG TGAAACGCGC TCTCAGAAAA
AGCAGTCTCT CCGTAGGAGA TATTGATGGA CTCCTTCTTG TTGGTGGATC AACGATGGTA
CCAATGATAA GAAGCAGAGT TTCCACGTTT TTCGGGGAAG AAAAAGTCGT AACAGGAGTC
AATCCAGAGA CAATTGTTGC TTGCGGCGCA GCATTGATGG GAAGCTTTCT TAATGGTAAG
AATCCTAAGA GGGTACTTTT ATTAGACGTC CTACCGCTCT CATTAGGCAT AGAGACTCTT
GATGGTACGA TGGAAAAAAT CATCATGAAA GATACCCCAG TTCCAGTCAA ACAGTCACAA
GTACTAACCA ACGCAGTTGA TGGTCAAACT TCTTTTAAGA TACATGTCTT ACAAGGAGAA
AGAGAATTCG CTCGTGATAA TAGGTACTTA GCAGAGTTCA CACTTAACAA CCTACCCCCG
CTCCCAATGG GTAAAGCGAG AATAGAGATT ACCTTTAGCG TAGATGAAGA CGGTATATTG
AAGGTAAGTG CGACCGAATT GCTCACAAGA AAGACACAAG CAATTGAAAT AAACCCGCAC
TATGGCCTAA AAAGAGAAAC TGTGCAGAAG ATGGTAGAAG ATTCCCTAAC TAGCCTCGCA
GAAGACATAA AGAGAAGGTC AGTAACAGAT GCACAGAGAC ATGCCGAGCG TGTTTTACAG
GTTCTAAGGA AAGCATTAGC CGAGCACGAA CCCTTACTCG TCAGCAACGA AAAAGAAACA
ATTGATGAAC ATATGCAACT TATAGCAAGA AGCATACAAA AATGTGATAG CATCGAAATT
AGAAAAGCAA CTGAGGGACT AGAACGAGTT GCAGAACCGT TCCTGAAGCG AAGACTAGAC
TTTCTTTTTA AGAAAATGGA AATAGACCTG AATAAAACCT GA
|
|---|
| Protein sequence | MQVITINEPR QKLDREVIIG IDFGTTNSLV CIFDGSKCVV IPQEGGDVLL PSVIGVKDKD
IIIGKEAKKC RGHILSIKRI IAKKAGIPGS IRNNPQEMCT LSIGYASRIF ASLKRTAEKY
LGHCVNMAVV TVPAYFDNAS RTAIKDAATI AGLNVVRLLS EPTAAALFYG IDEKKEEGRY
IVYDLGGGTF DVSILEFHKG IFKVSCTDGD DYLGGDNFDQ ALLEHLLKKY ALEPTDEEKA
ALLVVCIKIK EELSHQNRVT NYLDYRGQNL CFEITLDEFE KIIEKDVEKT INIVKRALRK
SSLSVGDIDG LLLVGGSTMV PMIRSRVSTF FGEEKVVTGV NPETIVACGA ALMGSFLNGK
NPKRVLLLDV LPLSLGIETL DGTMEKIIMK DTPVPVKQSQ VLTNAVDGQT SFKIHVLQGE
REFARDNRYL AEFTLNNLPP LPMGKARIEI TFSVDEDGIL KVSATELLTR KTQAIEINPH
YGLKRETVQK MVEDSLTSLA EDIKRRSVTD AQRHAERVLQ VLRKALAEHE PLLVSNEKET
IDEHMQLIAR SIQKCDSIEI RKATEGLERV AEPFLKRRLD FLFKKMEIDL NKT
|
|---|
| |