Gene NSE_0283 details

Gene Information

• Locus tag: NSE_0283
• Symbol: rpsE
• ID: 3931470
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Neorickettsia sennetsu str. Miyayama
• Kingdom: Bacteria
• Replicon accession: NC_007798
• Strand: +
• Start bp: 231845
• End bp: 232363
• Gene Length: 519 bp
• Protein Length: 172 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 637900439
• Product: ribosomal protein S5
• Protein accession: YP_506174
• Protein GI: 88608248
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0098] Ribosomal protein S5
• TIGRFAM ID: [TIGR01021] ribosomal protein S5, bacterial/organelle type

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.0269047
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAACG TCGATCATAG AAATTTAGAT CTTTTCGAGA GCGTTGTTGA CATAGCAAGA 
GTAAGTAAAG TTACGAAAGG TGGTCGTCAA TTTTCGTTTA GAGTTGCCGC ATTGGTGGGA 
GATAAGAAGG GTTGTGTTGG TTATGCTACT GCGAAGCATG ATGAGGTGCT TGATGCACGC 
AGTAAGGCTG TGAGAAAGGC AAAAGGTGCT ATGATCCGTT TTCCGCTTAG GGAAGGCAGG 
ACTATCCATC ATGATTGTTT CTCGAAGCTT GGTGCTAGCA AACTGTTTAT AAAACCTGCT 
CCTGAAGGTA CCGGAATAGT TGCTGGTGGT GCCATGCGAA AGTTCTGTGA AATGCTGGGT 
GTGTCGGATA TTATTGCCAA GTCCTATGGT TCCTCTACTT CTGGCATAGT AATACGGAAT 
GCTATTAAAG CGTTTTCGCT GGTGTGTTCC CCTGAGTATG TCGCTGGCAA GAGAAATAGA 
AAGAAGTCAA AATTTATTAG TAAAGCTGTT ACCCAATGA 

 

Protein sequence

MKNVDHRNLD LFESVVDIAR VSKVTKGGRQ FSFRVAALVG DKKGCVGYAT AKHDEVLDAR 
SKAVRKAKGA MIRFPLREGR TIHHDCFSKL GASKLFIKPA PEGTGIVAGG AMRKFCEMLG 
VSDIIAKSYG SSTSGIVIRN AIKAFSLVCS PEYVAGKRNR KKSKFISKAV TQ