| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NSE_0192 |
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| Symbol | |
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| ID | 3932105 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Neorickettsia sennetsu str. Miyayama |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007798 |
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| Strand | - |
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| Start bp | 161491 |
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| End bp | 164568 |
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| Gene Length | 3078 bp |
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| Protein Length | 1025 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637900348 |
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| Product | AcrB/AcrD/AcrF family transporter |
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| Protein accession | YP_506087 |
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| Protein GI | 88608540 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.958952 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTGATT TTCTTTTGGA GCGCAACAAG GCTGTATTGG TGCTTTGGTT CATTCTAATT
GCGGCTGGCC TTTATTCTTG TTTTGTCATC TCGAAGGAAC AAACTCCGAA TATGGAAATA
CCGTACATAC TGGTAAATGC GGTTTTAACA GGGGTGTCAG CTGAGGATAG CACAAGATTT
TTGTCAAAAG AACTCGAAGA TTCTCTACGA TCTATCGAAC ATCTGAAAAG CATTACCTCA
CAGTCTGTTG AAAATGCTTC ATCCATACTG ATGGAGTTTG AGGTTGGATT TGATAGTGCA
AAAGCCTTAG CTAGTATCAG GGATAAATTG GATCAAGTTG TTAGTAAACT TCCCAAAGAC
ACGCTGAGAC CTACCGTCGA ACAGGTTAGT ACTGCTCTTA TCCCTGCAGT TGTGGTTACA
GTCTCAAGCA ATTTAGGAGT GGAAGCAACG CAAATGGTTG CAACTAAGCT ACGTGACAGA
TTAAACACTC TAGCAAATGT TCTTTCGACA AAGATAATTG GAAAACGAAA AAAGATTGTA
GAAATTATGA TCGACCCGAA GACATTCTCT AGGTACAACA TTGGCTTGCA TAATATCGTA
AACACATTAC ACCAAAATAA CACACTTATT CTTTCAGGTA GCTTCCCCAG TAACGAGTAT
CTCGTTTCCA CGAATGGACT TGTAACTCAC CTCAATAAAC TCAAGGAACT TCCTATATCA
TTGAACAACG GAAACATATT AACTCTAAAG GATATTGCAG ATGTAAATGG CGTTTTTGAA
AGGGAGAAAG CCCTCTCAAG GATAGGTGGG ATGGATACCG TAGTAATTGA GGTGTCAAAA
GCAGGTGGAA AGAACCTTTT GGAAACAGTC AAGCAAGTAC AAGAGGAGGT CTCCAAAATG
CAGGCAACTC TCCCTGAAGG ATTCTCCTTA TCAACAGAAT TTGATACCTC AACAGAGGTT
AAGGAGGTCC TCACAGACCT CAAGAACAGT ATTGCACTAA CTGTCGTGAT GGTTGTTGCC
ATCATGGTGG TCTACATAGG ATGGAAGATG GCGCTTATGA CCGCTTTCAC AGTACCTGGT
TCGATATTCA TAGCGATCTT GCTCCTGTAT GTAGGTGGAT TCACGATGAA CATCGTGGTT
CTCTTCAGTT TAATCATGTC GGTTGGAATG ATTGTAGATG CAGCAATCAT AGTAAATGAG
TATGCAGACA GAAAAATGCT TATGGGCTCT TCCGCAAGAG AAGCTTACAC TTTGTCAGCA
AGGAAGATGT TTTGGCCAGT GCTATCTTCG ACTGCAACCA CGTTAATTGT TTTGGTGCCT
TTGCTATTCT GGCCTGGGCT TGCAGGTGAA TTCATGAAGT TCCTCCCAAT CACACTTATT
TTTACACTTT CCGCATCAGT CTTAATGTCA GTTGTTTTCA CTCCGGTTAT CGGAAGTATG
ATCGGGACAC CATCGACATC TGATCCAGTG GAAATTTCTA AGATCTTTGC AATAGATCAA
GCGGACCCTT CAGCAATGGG AAAAATTTCT GGGAAATACT GTCGACTGCT AGAAAAGCTC
CTCGATCACC CGAAAGCTGT AGTTGCAGGA ATCTCCGTGT TCCTTGTACT GAGTATCGGA
GGCTATTACA TTTTTGGTAA AGGACTGCAG TTTTTACCAA ATGTAGAACC TAAAAGCTCT
ACCATTTTGA TTAAGGCGGT CGAAAATCTC ACTCTCGCGC AAAAGAGGAC AATAGTCGAA
ACAGCGGAAA AAACAATCTG TGAGACACCA GAAATTAAAA CCTGCTATAC AAAGATCGGA
ACACTAGGCA ATGATGTAAT AGGAAGTGTT CAAGTCGAGT TTGCACATTG GAAAAAGCGT
AGAAAAATTG CTGCGATCAA CGACGATATA GAGAGAAGAA TGCAGTCTAT TAAGGGTATT
CAGTTTGAGC TTTTTACCCA GAAAGATGGA CCAATACAAG AAAAGCCTAT CAAAATTGTC
ATAAGCGGTA CGTCATACGG AGAAGTTGCA CAGGCTGCAG CATCGATCGA AGAGATGCTC
AGCAAAATTA ATGGTACAAA GAGTATCAGT GACGATACAT CAGTACAGAA ACTGGCCTGG
GAGGCAGTTA TAGATAGAAA CAAGGCTGCA CGTTATGGAG TTGATGTTGC AACAGTTGGA
CAATATATAG CTCTTGCTAC TAGTGGCATA ACAGTTGGCG AGTACAGAGG CAATGACCAC
GAAGAAAAAT TAGATATCGT ACTCACGCTC CCAGAAGAAG GAAAAAGTGT TTCCTCAATT
CTGGGCATGA TGATTCCATC TCAGAAAGGA ATGATTCAAC TGTCATCCTT AATGAAGGTG
AAACCAATAG CAAAGACTAC CACAGTAAAA CGGTTTAACT CTGAACCAAC TATACACGTG
TATTCGGATG TGCAGCCGGG ATTCCTTTCA CATAATATTG TCAAATCGCT TAGAAAAGAA
ATTGAAAAGC ACAAAGAGCT ATCCCAGTTA AAGATCAGTT TTAAGGGCGA ACAGCAAGAT
CAAAGTGAGA CAACACGTTT TTTGGTGGTT GCATTTCTTG TATCCACACT TTGTATGGTA
CTGATCTTAC TTCTTCAATT TAACAGTTTT TGTCAAGTTC TGATCATTTT AACTGCCGTT
GCACTATCCA CAGGAGGTGT GACATTTGGA TTACTTATAA CGCATCAACC ATTTATTGTC
GTGATGAGCG GTATAGGAAT AATCTCGCTA GCTGGAATAG TAGTAAACAA TAATATACTA
CTCATTGATG CTTATAACGA TTACATGAGT GAGTCTACTG ACAAAAAGCG CTCAATCATA
AGAGCTGCAA TATCCAGATT CAGACCAATA CTTCTCACCT CAGGAACAAC TGTACTAGGA
CTTTTACCAA TGGTTTTCTG CATAACCATA AACCTAGTGG ATTTCACGAT TTCGTATGGA
GCTCCAGCAA CACAATGGTG GCAAAGCTTG GCAACAACCG TCGCAGGGGG ACTGTCGTTT
ACGACGCTTT TAACACTTAT TCTGACTCCA GCACTACTGA TGCTTTCCCC TACTCCAAAA
TTAAATACAC GAACTTAA
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| Protein sequence | MLDFLLERNK AVLVLWFILI AAGLYSCFVI SKEQTPNMEI PYILVNAVLT GVSAEDSTRF
LSKELEDSLR SIEHLKSITS QSVENASSIL MEFEVGFDSA KALASIRDKL DQVVSKLPKD
TLRPTVEQVS TALIPAVVVT VSSNLGVEAT QMVATKLRDR LNTLANVLST KIIGKRKKIV
EIMIDPKTFS RYNIGLHNIV NTLHQNNTLI LSGSFPSNEY LVSTNGLVTH LNKLKELPIS
LNNGNILTLK DIADVNGVFE REKALSRIGG MDTVVIEVSK AGGKNLLETV KQVQEEVSKM
QATLPEGFSL STEFDTSTEV KEVLTDLKNS IALTVVMVVA IMVVYIGWKM ALMTAFTVPG
SIFIAILLLY VGGFTMNIVV LFSLIMSVGM IVDAAIIVNE YADRKMLMGS SAREAYTLSA
RKMFWPVLSS TATTLIVLVP LLFWPGLAGE FMKFLPITLI FTLSASVLMS VVFTPVIGSM
IGTPSTSDPV EISKIFAIDQ ADPSAMGKIS GKYCRLLEKL LDHPKAVVAG ISVFLVLSIG
GYYIFGKGLQ FLPNVEPKSS TILIKAVENL TLAQKRTIVE TAEKTICETP EIKTCYTKIG
TLGNDVIGSV QVEFAHWKKR RKIAAINDDI ERRMQSIKGI QFELFTQKDG PIQEKPIKIV
ISGTSYGEVA QAAASIEEML SKINGTKSIS DDTSVQKLAW EAVIDRNKAA RYGVDVATVG
QYIALATSGI TVGEYRGNDH EEKLDIVLTL PEEGKSVSSI LGMMIPSQKG MIQLSSLMKV
KPIAKTTTVK RFNSEPTIHV YSDVQPGFLS HNIVKSLRKE IEKHKELSQL KISFKGEQQD
QSETTRFLVV AFLVSTLCMV LILLLQFNSF CQVLIILTAV ALSTGGVTFG LLITHQPFIV
VMSGIGIISL AGIVVNNNIL LIDAYNDYMS ESTDKKRSII RAAISRFRPI LLTSGTTVLG
LLPMVFCITI NLVDFTISYG APATQWWQSL ATTVAGGLSF TTLLTLILTP ALLMLSPTPK
LNTRT
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