| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NSE_0178 |
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| Symbol | |
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| ID | 3932002 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Neorickettsia sennetsu str. Miyayama |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007798 |
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| Strand | + |
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| Start bp | 147285 |
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| End bp | 147983 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637900334 |
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| Product | putative 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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| Protein accession | YP_506073 |
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| Protein GI | 88608617 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
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| TIGRFAM ID | [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.756542 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTAAAA TTGCCGGTCT AGTTGTTGCT GGAGGTGGTG GTTCGAGGAT AACGAATTCG
GTTCTCCCAA AGCAGTACTT GCAGGTCCGC GGCAAGGCAA TTTTGCAGTA CACAGTTGAA
GCCCTTTTTG CCCATCCGAA AATTGAGTGT GTACACCTTG TTGTCAATTC AAAGTGTGAG
GTGCACTATT TGCCAATTTT GCGCAACTTG AGTGGGTATG TAGTTTCATT GTCAGAAGCT
GGTAATACTC GAACGGATTC AGTTTTTTCT GGGCTAAAGG CGTTAGAGTG CTTAAATCCT
AGTCACGTAT TGATACAGGA TGCAGCTAGG CCTTTTACGA CCCCTAAGGT GATCAATGCA
GTAATTAAGA GCTTATTGGA GGGTTGTGAG GGTGTTGTTC CAGTTGTGCC GGTACAGGAC
ACAATCATAA AAAGAGAACC TGAAGGTATA GTAACCGATG TCAATAGAGA TGAGTTAAGA
ATAGTGCAGA CGCCACAAGG GTTTGATTTT TGCAAGATTT TTGCAGCATA TAAGGCGCAC
TTCATGTGTC CTTCTAAGAG GTATACAGAT GACGGAAGTC TAGCGCTTGC ACACGGTATA
AAGGTGGAAT GTATCCCAGG TGACAGCAGT AATCTTAAGA TTACCCATCC TTTTGATTTG
AAGTTTGCTG ATTTTCTCTT AGCACAGAGT CACCGATAA
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| Protein sequence | MGKIAGLVVA GGGGSRITNS VLPKQYLQVR GKAILQYTVE ALFAHPKIEC VHLVVNSKCE
VHYLPILRNL SGYVVSLSEA GNTRTDSVFS GLKALECLNP SHVLIQDAAR PFTTPKVINA
VIKSLLEGCE GVVPVVPVQD TIIKREPEGI VTDVNRDELR IVQTPQGFDF CKIFAAYKAH
FMCPSKRYTD DGSLALAHGI KVECIPGDSS NLKITHPFDL KFADFLLAQS HR
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