Gene NSE_0169 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNSE_0169 
Symbol 
ID3931983 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNeorickettsia sennetsu str. Miyayama 
KingdomBacteria 
Replicon accessionNC_007798 
Strand
Start bp138386 
End bp139495 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content40% 
IMG OID637900325 
ProductSmr domain-containing protein 
Protein accessionYP_506065 
Protein GI88608112 
COG category[S] Function unknown 
COG ID[COG2840] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAATTGC AGGGGAAAGC ATATGTTTTA CCTAAACAAT CGCAATCCAG TGTGTGCATA 
TTCGCAGATA GTGCAAGTAC TGGCATCCTA AAATGCAACG CGCTTGTAAC GAACAAGCCT
CAGCTATTTC TCGTGATAAA AACAACAAAT TCTGTCCCTT TACTACTCTC TGATCATATA
AACCGTGTTA TAGGGATCGC AAATGTAGAT CTCAATAGGT CAGATGAATT AGTCCAAAAT
ACGGTTCTTA GGATGTTAGA GTCTGGCGCT GAAATGAGGT ATATAAACGC TGTCCTAGGA
CCGTACATGC ACGACAAATA CAACAACACG AAAAACGGAC TCCCTAGCAG TGATACAAGC
ACGAGTTTCG TACAATACCC TTCCTGGAAA TGTACTATCA ATTTACATGA CCATTCCATA
AAATTATTAG AGAAGGTGGG AGTACGAAGT ATACGGGGCA TAAACATGTA TACTCACTCA
CACGGAAAGG AAAGTACTCG GGATAATCCT GACGTGTCTA AAGAAGATAG TAAAACTTGC
AACATAAGCA TGATTTCTAT CAGCACGACA GAAAATTCTC ACATGAGTAT GCAGTGTGAA
AGCACAACAG ACTGGGACAG TTTTATACAA GATATCACAA AGGTTTCAGA CAGATTTGCC
TACCCATGTC ATAACCTAAG AAAACCTGCG AGGGACATTA CACAAAACAT AGAAGGCAAA
GTCGAGATAT ACAATAAATC AAGTAGCTTG AACACAAATA ATCTTGATTT CGCTAAAAGT
GCGGATCCTG ATTTTTTGCG AAAAATCAAA CGCGGAAAGA TCAATATAGA TAAAACACTA
GATCTTCACG GTGAAACTAT GGAAAGCGCT TACCAGAAAA CAATTAAATT CATTTTAGAA
AATTACGTAA ACGGTTTTCG TCACCTTCTA GTTATTGTCG GAAAAGGAAG AACCGGTGAC
GCAGTTATCA AGACAAGTTT TGTATCATGG CTAGAAAACA ACGCCGAAAT ACAAGGTCTG
ATCAAATTCG TATCAGAGGC ACTGCCGCAT CACGGAGGCG AAGGGGCATA TTACGTCCTT
CTAAGAAGGA AAAAGCCATC CGACGAATAG
 
Protein sequence
MELQGKAYVL PKQSQSSVCI FADSASTGIL KCNALVTNKP QLFLVIKTTN SVPLLLSDHI 
NRVIGIANVD LNRSDELVQN TVLRMLESGA EMRYINAVLG PYMHDKYNNT KNGLPSSDTS
TSFVQYPSWK CTINLHDHSI KLLEKVGVRS IRGINMYTHS HGKESTRDNP DVSKEDSKTC
NISMISISTT ENSHMSMQCE STTDWDSFIQ DITKVSDRFA YPCHNLRKPA RDITQNIEGK
VEIYNKSSSL NTNNLDFAKS ADPDFLRKIK RGKINIDKTL DLHGETMESA YQKTIKFILE
NYVNGFRHLL VIVGKGRTGD AVIKTSFVSW LENNAEIQGL IKFVSEALPH HGGEGAYYVL
LRRKKPSDE