| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NSE_0151 |
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| Symbol | |
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| ID | 3932040 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Neorickettsia sennetsu str. Miyayama |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007798 |
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| Strand | + |
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| Start bp | 120679 |
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| End bp | 121725 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637900307 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_506049 |
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| Protein GI | 88608363 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.961169 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGGTTCG TTTTGCCGAC GGTCTTGTTT GGCCTAGTAC TTCTGGTACT GGCTTTCAAG
TTCATAGGGG GTGGCGTTCG TTCTGAGAAT GAAAAAGCAG TCTCAGAAGC AAGTTCGTTG
CGTACCATGG TTGTCGAACC AGTATTGCGG GCGATTGTTG TAAATGGCTA CGGAACTGTT
GACGCCGCAC AGCGTTACTT TTTGTATTCG CAGGTGTCTG GGGAGGTAGT GGAAAAACTT
GCTGGGGACG GGCAGATATT GCAAGAGGGT GATACGTTGC TCCGTCTTAA TAGTGAGGTG
TGTGAAGCTC AATTGGAAAG TTTGAAAGCT TTGCTAGAAG AAAGGAAAAT TGAGTACCGG
GCTGCTAAAG AACTTAAGGA TAGTGGCCAT TCGTCGGAAG TAAAACTTTC AGCTGCTCTT
GCTGGTCTCA AAAAAGCTGA AGCGGATCTG AAGGCCTTAG AAAGGCAAAT GGAAAAACAC
GCAATTAAGG CTCCAGTTTC GGGCGTACTT GGGAAGATAA ATGTTGCTGT TGGGGATGTC
GTATCACCAG GGGCGACACT CATAGCAGAA TTGATCCCAT TCGGGAACTA TATTGTGCGA
ATGAATGTTT CAGAAGCAGA CATTTTGAAC TTGAGGGAAG GTATGGAAGT TGAGATTATT
CTTCCCGAGA TAGGGGCTGT AAATGGAAGA ACAAGGTTTG TTTCACTTGT TCCAAGTGGT
CCTACAGGAA CATTTCCCGT TGAAATTGTG GTTGAAGATA ATGAATGGAA TAGAAATCGT
GTACCGCTCG GAATGGTAGT CGATACAAGG GTGGTTATAG GTAGAAAATT TCTCTACAAA
GTGCCTGCTA GTGCGCTCTT CCTAGGAAAA GATGGGAAGA TTGCCGTAGA GATTTTCAAA
GATGGTTTAC TCCGGCCCAT TGAGGTTGGG ATAGTGGAAG AAGAGGGCGA AAATTTTTGG
ATACAGCAGA GCACAGTTGG GGGACAGCTA GAAGTCGTTG TTGCTGGTGG AGGAGTTTTC
AGACGCCAGG AAATTAAAGC GAGCTGA
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| Protein sequence | MRFVLPTVLF GLVLLVLAFK FIGGGVRSEN EKAVSEASSL RTMVVEPVLR AIVVNGYGTV
DAAQRYFLYS QVSGEVVEKL AGDGQILQEG DTLLRLNSEV CEAQLESLKA LLEERKIEYR
AAKELKDSGH SSEVKLSAAL AGLKKAEADL KALERQMEKH AIKAPVSGVL GKINVAVGDV
VSPGATLIAE LIPFGNYIVR MNVSEADILN LREGMEVEII LPEIGAVNGR TRFVSLVPSG
PTGTFPVEIV VEDNEWNRNR VPLGMVVDTR VVIGRKFLYK VPASALFLGK DGKIAVEIFK
DGLLRPIEVG IVEEEGENFW IQQSTVGGQL EVVVAGGGVF RRQEIKAS
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