| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NSE_0146 |
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| Symbol | |
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| ID | 3931949 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Neorickettsia sennetsu str. Miyayama |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007798 |
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| Strand | + |
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| Start bp | 118090 |
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| End bp | 119082 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637900302 |
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| Product | ribosomal large subunit pseudouridine synthase A |
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| Protein accession | YP_506045 |
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| Protein GI | 88608012 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.814185 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTATAAAT GCATCGTAGC TGAGTGTGAT GCAGGAAATC GTTTGGATGT TTTCCTGCAT
CGCTGTTTAC CCTTTTTTTC TCGTAGCTTT ATTAAGCACT GCATAAAAGG TAGTAGGATT
GAATCCGAAG GAAAGATTCA GTTGGAGCCC TCTAGACGGG TTGTGGTTGG TGAGGAGTAC
CACTTGTTTG ATCTACCCTT GGAGCGAAAA CCTAGACATG CATTTGTACA ACCTCTAGAT
GTAAGATACG AGGACGATTG CCTACTTGTC ATTTATAAGC CTGCTGGCCT CGTTGTTCAT
CCTGGAATAG GTAACAGAGA GCAAACGCTC GTCAACATTC TTGAGCACCA CTATCCTACG
GAAAAACTCA GTAGTCTTGA CTCATCTCGC CCAGGGATAG TGCACCGACT AGATAAAGAT
ACAGCAGGTT TCCTTATTGT CGCGAAAACC AATCCCGCAC ATCTATCCCT TTCCCAGATG
ATCAAAGAAG GTGTTATCCG GCGTGAGTAT CTTGCACTTG TGCATTCCGT TCCAGCATCT
TTGTCTGGAG AGATAAAGAA ACCAATAAAA AGGGGACAGA GAAAAATGAT GATAGGGAGA
TGTAGCGGAA AACCCGCTTT GACTTACTAC GGCGTTATCG CGCGTACGGT TGACAGAAAA
TGTAGTCTTG TTCATTGTAG GTTGGGAAGC GGAAGAACGC ATCAAATTAG GTTACATATG
AAATCCATAG GTTGTCCTGT TGTTGGAGAC AAGTTGTATG GACTCAACAG AGATGCTGAT
CTCTGTGCCC CACACCACGC CTTATGGGCT TATTCTCTTC AATTTAGGCA TCCATTTACC
CGTAAGAATA TGGCCTTTTA CATTGAGCCA GCTAGTATAA TTCAGCCCTT TTTAGAAAAA
ATTTCTATCA GCCGAAGTCT ATTCGTGACA TTTCCAGAAG ACAGAAGAAC TATACGGTCA
GCGCAATCCC AAAGTATGTT AAAAATAACA TGA
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| Protein sequence | MYKCIVAECD AGNRLDVFLH RCLPFFSRSF IKHCIKGSRI ESEGKIQLEP SRRVVVGEEY
HLFDLPLERK PRHAFVQPLD VRYEDDCLLV IYKPAGLVVH PGIGNREQTL VNILEHHYPT
EKLSSLDSSR PGIVHRLDKD TAGFLIVAKT NPAHLSLSQM IKEGVIRREY LALVHSVPAS
LSGEIKKPIK RGQRKMMIGR CSGKPALTYY GVIARTVDRK CSLVHCRLGS GRTHQIRLHM
KSIGCPVVGD KLYGLNRDAD LCAPHHALWA YSLQFRHPFT RKNMAFYIEP ASIIQPFLEK
ISISRSLFVT FPEDRRTIRS AQSQSMLKIT
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