| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NSE_0138 |
|---|
| Symbol | |
|---|
| ID | 3931408 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Neorickettsia sennetsu str. Miyayama |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007798 |
|---|
| Strand | - |
|---|
| Start bp | 112840 |
|---|
| End bp | 113199 |
|---|
| Gene Length | 360 bp |
|---|
| Protein Length | 119 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 637900294 |
|---|
| Product | putative RNA pseudouridylate synthase, truncation |
|---|
| Protein accession | YP_506037 |
|---|
| Protein GI | 88607964 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGATCGGTG AGGAATACCA CTTGTTTGAT CTACCCTTGG AGCAAAAACC TAGACATGCA
TTTATACAAC CTCTAGATGT AAGATACGAG GACGATTGCC TACTTGTCAT TTATAAGCCT
GCTGGTCTTG TTGTTCATCC TGGAATAGGT AACAGAGAGC AAACGCTCGT CAACATTCTT
GAGCACCACT ATCCTACGGA AAAACTCAGT AGTCTTGACT CATCTCGCCC AGGGATAGTG
CACCGACTAG ATAAAGATAC AGCAGGTTTC CTTATTGTCG CGAAAACCAA TCCCGCACAT
CTATCCCTTT CCCAGATGAT CAAAGAAGGT GTTATTCATG CAGAGCAAGT TACAGCATAA
|
|---|
| Protein sequence | MIGEEYHLFD LPLEQKPRHA FIQPLDVRYE DDCLLVIYKP AGLVVHPGIG NREQTLVNIL
EHHYPTEKLS SLDSSRPGIV HRLDKDTAGF LIVAKTNPAH LSLSQMIKEG VIHAEQVTA
|
|---|
| |