Gene NSE_0121 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNSE_0121 
Symbol 
ID3931632 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNeorickettsia sennetsu str. Miyayama 
KingdomBacteria 
Replicon accessionNC_007798 
Strand
Start bp99201 
End bp100451 
Gene Length1251 bp 
Protein Length416 aa 
Translation table11 
GC content41% 
IMG OID637900277 
Producthypothetical protein 
Protein accessionYP_506021 
Protein GI88608745 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.651767 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTCTCTTT TTACATCTGT TATGAAGCAG AGATGGCTCT CTCTTGGTGT CCTTGCTTTG 
GGACTCTCGG GGATTTTCTC CCTATTTGTA GTCCTACTGA GATTACCCTT CTTCATTGGT
TTAGTACCAA ATATTTTTGA TGTTTCACTC GTTATACATG TTACACTCGG CATCAACGCG
TGGATGCTTG CTATCACAGC TGCTACCATA GCAGGAGAGG GGTATTTCCA AAAATTCAGT
CACAACTTAT GTCTGCTAGG AGTAATTTTT ATTTTTATTG CAGGCTTTAT CCCGGAAACG
CACGCGTTGA AAAATAACTA CATCCCCTTC TTAAATAATT TACCTTATGT TCTAGGCACA
GCGCTACTTT CATTTGGACT TTCCGTAAGC GCTATCAACA CGCTGTGCAA TAGGACAGCA
GGAGAGTGCA AACGAATCAC TGCACTAATT TTTTTAATCT CGCAACTATG TACTTATCTG
GCATACGCGA GGATGCCAAG TGGCATCACG TTATATGACT TTTATGAGTA TCTCTTCTGG
GGGGGCGGAC ACATACTGCA GTTTGTGTTT TGTCAGACAT TAATGCTAGT GTACGCAACA
CTCCTCGGCA TAGGGACATC TGATAGGACC CTACGGGGAT TATCTCTATT TAACTTACTT
GCTGTTTTGC CAACTCCGGT ATTATATTTC TTTTTCTCCC CTGATAGAGA AATCCTTATA
CGGGTTTTTA CTTATCACAT GCGTGTTTTA GGAAGTGTGG CACCAATGAT TTTTATTTTT
TACCTACTTT CTCTTCCAAA AAAGAGAGTC GATTGGTCCA ATATCGCTGC TTTCACTTTC
TCAGCATGCC TCTTCATCTA TGGTGGACTT CTAGGCTTTC TTATCAGAGA GAGCAATGTC
GTTATTCCAG CTCACTACCA TGGTTCAATC ATTGGAATAA CTCTTGCTTT CATGGCATTC
GCTTACCATT TTACAGGAAT ATTATCTTTA AAACTTCCAA TGTTGCAGCT CACAACATAT
AGCATTGGAC AATTTGCACA CATTACAGGG CTACTTCTCA TGGGTGGATA TGGTGCACTC
AGAAAAAGCG CTGGAATGGT AGGAGGAAGT ACCACGCTGT TCAAGTCCAT CTTCTTCTTC
GGAGGCAGCT TGAGTATCTT ATCCGGTGGA CTGTTCGTAA TTCTCCTTAC ATCGACTCTT
CTAAAGAATG AAAAAGGAAA TGAGACTCTT AAGTCCAGAA ACTCTTTATA G
 
Protein sequence
MSLFTSVMKQ RWLSLGVLAL GLSGIFSLFV VLLRLPFFIG LVPNIFDVSL VIHVTLGINA 
WMLAITAATI AGEGYFQKFS HNLCLLGVIF IFIAGFIPET HALKNNYIPF LNNLPYVLGT
ALLSFGLSVS AINTLCNRTA GECKRITALI FLISQLCTYL AYARMPSGIT LYDFYEYLFW
GGGHILQFVF CQTLMLVYAT LLGIGTSDRT LRGLSLFNLL AVLPTPVLYF FFSPDREILI
RVFTYHMRVL GSVAPMIFIF YLLSLPKKRV DWSNIAAFTF SACLFIYGGL LGFLIRESNV
VIPAHYHGSI IGITLAFMAF AYHFTGILSL KLPMLQLTTY SIGQFAHITG LLLMGGYGAL
RKSAGMVGGS TTLFKSIFFF GGSLSILSGG LFVILLTSTL LKNEKGNETL KSRNSL