| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NSE_0119 |
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| Symbol | clpB |
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| ID | 3931955 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Neorickettsia sennetsu str. Miyayama |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007798 |
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| Strand | - |
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| Start bp | 94667 |
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| End bp | 97231 |
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| Gene Length | 2565 bp |
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| Protein Length | 854 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637900275 |
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| Product | ClpB protein |
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| Protein accession | YP_506019 |
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| Protein GI | 88608018 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR03346] ATP-dependent chaperone ClpB |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGGTTCG ACAAATTTAC AGATAATTCA GCGTCAATCA TTCAAAGCGC GCAGCTAGAT
GCGGTAAGCA TGGGGCATCA GACGCTTACA TCGCTTCACA TACTTAGGGC GCTGCTGAAG
AATACCAATG GTATTGTCAC CCAACTACTA GAACAATGCG GCGCAAATTT AGACGTGATT
CTAAATAGCG TAGAACTGAC ACTGAGAAAG CTACCATCCG TGAGTGGCCA AGGTGCAGGA
CACATTCATC TAACGCCGGA TGCAGCACAG ACAATACAGA CATCAATTGA AATAGCTGGA
AGGTCACAAG ACAGTTTCGT CACTGTAGAA AGACTCTTGC AAGGTGTAGC AGCAACAGAA
TCTGAAGCAT CTAAAATTCT AAAGGAACAA GGTGTAGACG CAGCAAAGTT GCAACAAATC
ATTGACGCAA ATAGGGGAAG TAGGAGAGCT GATTCTGCAA ATGCGGAGAA CAACTTCAAC
GCTCTTAGAC GCTATACAAA AGACCTAACT GAGATTGCAC GCTCGGGAAA ACTTGACCCG
GTTATCGGCA GAGACGAAGA AATCCGGAGG GTGATGCAGG TCTTGTCTAG ACGAACAAAA
AATAATCCGG TACTCATTGG TGATCCAGGC GTTGGCAAGA CGGCAGTAGT TGAAGGTCTT
GCAATGCGGA TGGTCGCAAA AGATGTTCCA CAAAATTTGG CAAGCGCTTC TCTACTTTCA
CTTGACTTAG GTGCACTAAT AGCAGGTTCA AAGTACAGAG GTGAATTCGA GGAAAGATTA
AAATCAGTAA TCAACGAACT TGCAGATTCT GGGGGTAGCG TCATTCTTTT TATAGATGAG
CTCCACACAC TCGTAGGTGC GGGTGCAACA GAAGGTGCAA TGGACGCCTC GAATTTACTA
AAACCAGCAC TTGCACGCGG GGAAATACAC TGCGTAGGTG CAACTACACT GGAAGAGTAC
AAGAAACACA TAGAAAAGGA TGCCGCACTA GCGAGGAGAT TTCAGCCGAT TTTCGTTGGA
CAACCCACAG AAGAGGATAC CATTTCAATA CTGCGCGGCA TAAAAGAGAA GTATGAAGTC
CACCACGGAA TAAGAATTGC TGATAGCGCA GTTGTCTCCG CAGCAGTTCT CTCAAATCGG
TATATCACAG ACAGATTCCT CCCAGATAAG GCCATAGACT TAATGGACGA GGCTGCAAGT
AAGATCAGGA TTGAATCTGA CAGTAAGCCT GAGGTAATAG ATGAACTCGA CAGGAAAATC
ATACAACTAA AAATAGAAGC AGAAGCACTG AAAAAAGAAA AGGATGCTAA TTCTATCGGC
AGATTGGAAA AAATAAAGCA GGATCTAGAA GGTCTTGAAA AAAAACAAGC GGATCTCGAA
AGCTCCTGGC AAGCTGAAAA GTCAAAGCTT AAAGAGATAC AAAAATTGAA AGAGGAACTC
AACGAAGCAC GGTATTCACT GGAGATTGCA CAGAGAAATG GTGATCTTGC AACCGCAGGA
AAGATCCTAT ACGGCACCAT TCCAGCCTTG GAAAATAGAT TGGTCAATGA AGAAAAACAA
GTAGGCGGTA CACTCCTAAA AAGAGAGGTC ACAGAGGACG ACATAGCAAA CATTGTTGCC
AAATGGACAG GAATTCCTGT TGAAAAAATG ATGGGGAGTG AACAACAAAG ACTTTTAAAG
ATAGAAGATG AATTGAAAAA ACACGTCATA GGACAAGATG AAGCCGTAGA AGCAGTCAGC
AGTGCGGTAA AACGCTCTAG AGCTGGCGTC CAGGATGCAA ATCGTCCGCT TGGATCTTTC
ATGTTTTTAG GTTCAACAGG CGTTGGAAAA ACAGAGCTCA GCAAAGCACT AGCAAAGTTC
CTGTTCGATA ATGAAACAGC ACTGCTTCGC ATTGATATGT CCGAATATAT GGAAAAACAT
GCCGTAGCAC GATTGATAGG TGCACCTCCT GGATATGTCG GGTATGAGGA AGGTGGAATA
CTTACTGAAG CAGTAAGACG GCGTCCATAT CAGGTAATCT TATTCGACGA AGTGGAAAAA
GCACATCATG ATGTGTTCAA TATATTGCTT CAAGTATTAG ACGAGGGCAG ACTAACCGAT
ACTCAAGGCC ATGTCGTTGA TTTTAAAAAT ACAATATTAA TTCTTACATC AAACCTGGGA
TCGGATGTTT TATCGGAAGT TACACAAATC ACCGAGGTTG AGAAAACTAA AATAATGGAA
ATAGTCAGGC AATTCTTCCG TCCTGAGTTT TTGAACCGTC TTGACGAGAT CCTTTTCTTC
AATCGCTTGA GCAAAGAAAA CATAGAAAAG ATACTGGAGA TTCAATTGCA TAAACTACAG
GAACGCATAA AAACCAAGAA CCTTCACCTT TCTTTTACTC ACGAAGCCAA GAGGTGGATA
TGTGAACAGG GGTATCATCC AGTATACGGT GCTCGACCAT TAAAACGCGT GATTCAGCAA
TACGTTTATA ATCCACTAGC ACAAGCAATC CTCTCGGGTA GCCTGCCTGA AAATGGCAAA
ATTATATTCG ATAAAATTGG TAACAAGCTA GAAATCCAGT ATTAG
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| Protein sequence | MRFDKFTDNS ASIIQSAQLD AVSMGHQTLT SLHILRALLK NTNGIVTQLL EQCGANLDVI
LNSVELTLRK LPSVSGQGAG HIHLTPDAAQ TIQTSIEIAG RSQDSFVTVE RLLQGVAATE
SEASKILKEQ GVDAAKLQQI IDANRGSRRA DSANAENNFN ALRRYTKDLT EIARSGKLDP
VIGRDEEIRR VMQVLSRRTK NNPVLIGDPG VGKTAVVEGL AMRMVAKDVP QNLASASLLS
LDLGALIAGS KYRGEFEERL KSVINELADS GGSVILFIDE LHTLVGAGAT EGAMDASNLL
KPALARGEIH CVGATTLEEY KKHIEKDAAL ARRFQPIFVG QPTEEDTISI LRGIKEKYEV
HHGIRIADSA VVSAAVLSNR YITDRFLPDK AIDLMDEAAS KIRIESDSKP EVIDELDRKI
IQLKIEAEAL KKEKDANSIG RLEKIKQDLE GLEKKQADLE SSWQAEKSKL KEIQKLKEEL
NEARYSLEIA QRNGDLATAG KILYGTIPAL ENRLVNEEKQ VGGTLLKREV TEDDIANIVA
KWTGIPVEKM MGSEQQRLLK IEDELKKHVI GQDEAVEAVS SAVKRSRAGV QDANRPLGSF
MFLGSTGVGK TELSKALAKF LFDNETALLR IDMSEYMEKH AVARLIGAPP GYVGYEEGGI
LTEAVRRRPY QVILFDEVEK AHHDVFNILL QVLDEGRLTD TQGHVVDFKN TILILTSNLG
SDVLSEVTQI TEVEKTKIME IVRQFFRPEF LNRLDEILFF NRLSKENIEK ILEIQLHKLQ
ERIKTKNLHL SFTHEAKRWI CEQGYHPVYG ARPLKRVIQQ YVYNPLAQAI LSGSLPENGK
IIFDKIGNKL EIQY
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