Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | NSE_0108 |
Symbol | |
ID | 3931715 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Neorickettsia sennetsu str. Miyayama |
Kingdom | Bacteria |
Replicon accession | NC_007798 |
Strand | + |
Start bp | 86211 |
End bp | 87413 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637900264 |
Product | hypothetical protein |
Protein accession | YP_506008 |
Protein GI | 88608265 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00192971 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTGGAA AGCGCGCTGA GCGAAAAGCT CTTCCAGTAG GAACTCAGAA AAAACCGGAA AGAGAGGATG GCAAAACTCA TACTCGTGCA GATAAGGGGA TCGGTGCGCA GGAAGTTCCT ATAAATGAGA CCTCAGATTC GGTATCGAAA CGATATATAT CTTATGCTAT TTTTAGCCTT GACGGGAACA TCGATGTACG TAAAGTTCCC ATCAACCAGT CGGTAGCTAC GGTGACACAA GAGCAACCAC TTTATATCTC TGTATGTCCG GAGATCCATG TGAGGAGAAC TCCGAGAGAT GTGTCATTCA CTACGTTAGA GCAAACAGGA AATAAGAGTG GTCAGTCGGT AAATGAAGTA GGGCAAAAGC GGGGGAGTGA ATTTTCTCGT GTCGTAAGAA ACGCAGCAAA AAATGGAGAA AAAAGTATTT TACGTGCTGC GCATGCGGTG ACAAATATAG AGGGGGATTT GATCAGTCAG TCAGCACACG CAAAATCACC TATGCTGCTG GGATCACCAT CTTCCTCTTT TAAAGAAAAA GAAGCGAGTA TTACTACTTC AATACCTGGT TTAAAAGGTT GTGTCTTAAC TTCAGATGGG CTTTTAGGTC CGGCCAGGGC AACTAAACCA AACTGGAGTG GTAATGTGGT AATTGTTGAT GTAGCTGAAA AAATCTTCAA GAAGTGTAGC TATGTTGGAA AAGGCGTTTC AGGTAGTTTA TACAAGGCCC TTGGAATTTT TGGAACTTCA GTTGGCAAGT TCGAGAAAAG AGAAATTAAT GAGGGGAAAA GGGTTCTTGA TTCGGGGATT TTTAGGCGTG ATGGTTACAG TGCGCGTGTC ATACATGTTT CTTCTATGAA CATAAATGAG ACTTCTAAAA GGAGAGAGAG CAAATGGAAT TTGTCTAAAG CTCTTTATAG AACCTTTACA AGAACATTCG CTAAGCTAAG AGGTATGTCA GGTTTGCCCG GTGATACAGT TGTTATGATA CCGGTGGTAC ATCTGGGAAA GTGTGCTGGG CGTTCGCTTC AACAGCAGTG TTTTGTTGAG GCATTGTATT CTTCTATTAA GGGGTTTGGT GATCGATCTT TACCTGAAGC TTTAGGAGTT AAAGAGGTTA GGATTTGTTG CGGCGATCCA AAAACACATG CTGTTTTAGC TGAGTTGATG AGTCAAAAAG CTAGTGCGGG TGTAGAGATG TAG
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Protein sequence | MLGKRAERKA LPVGTQKKPE REDGKTHTRA DKGIGAQEVP INETSDSVSK RYISYAIFSL DGNIDVRKVP INQSVATVTQ EQPLYISVCP EIHVRRTPRD VSFTTLEQTG NKSGQSVNEV GQKRGSEFSR VVRNAAKNGE KSILRAAHAV TNIEGDLISQ SAHAKSPMLL GSPSSSFKEK EASITTSIPG LKGCVLTSDG LLGPARATKP NWSGNVVIVD VAEKIFKKCS YVGKGVSGSL YKALGIFGTS VGKFEKREIN EGKRVLDSGI FRRDGYSARV IHVSSMNINE TSKRRESKWN LSKALYRTFT RTFAKLRGMS GLPGDTVVMI PVVHLGKCAG RSLQQQCFVE ALYSSIKGFG DRSLPEALGV KEVRICCGDP KTHAVLAELM SQKASAGVEM
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