Gene NSE_0108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNSE_0108 
Symbol 
ID3931715 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNeorickettsia sennetsu str. Miyayama 
KingdomBacteria 
Replicon accessionNC_007798 
Strand
Start bp86211 
End bp87413 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content43% 
IMG OID637900264 
Producthypothetical protein 
Protein accessionYP_506008 
Protein GI88608265 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00192971 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTGGAA AGCGCGCTGA GCGAAAAGCT CTTCCAGTAG GAACTCAGAA AAAACCGGAA 
AGAGAGGATG GCAAAACTCA TACTCGTGCA GATAAGGGGA TCGGTGCGCA GGAAGTTCCT
ATAAATGAGA CCTCAGATTC GGTATCGAAA CGATATATAT CTTATGCTAT TTTTAGCCTT
GACGGGAACA TCGATGTACG TAAAGTTCCC ATCAACCAGT CGGTAGCTAC GGTGACACAA
GAGCAACCAC TTTATATCTC TGTATGTCCG GAGATCCATG TGAGGAGAAC TCCGAGAGAT
GTGTCATTCA CTACGTTAGA GCAAACAGGA AATAAGAGTG GTCAGTCGGT AAATGAAGTA
GGGCAAAAGC GGGGGAGTGA ATTTTCTCGT GTCGTAAGAA ACGCAGCAAA AAATGGAGAA
AAAAGTATTT TACGTGCTGC GCATGCGGTG ACAAATATAG AGGGGGATTT GATCAGTCAG
TCAGCACACG CAAAATCACC TATGCTGCTG GGATCACCAT CTTCCTCTTT TAAAGAAAAA
GAAGCGAGTA TTACTACTTC AATACCTGGT TTAAAAGGTT GTGTCTTAAC TTCAGATGGG
CTTTTAGGTC CGGCCAGGGC AACTAAACCA AACTGGAGTG GTAATGTGGT AATTGTTGAT
GTAGCTGAAA AAATCTTCAA GAAGTGTAGC TATGTTGGAA AAGGCGTTTC AGGTAGTTTA
TACAAGGCCC TTGGAATTTT TGGAACTTCA GTTGGCAAGT TCGAGAAAAG AGAAATTAAT
GAGGGGAAAA GGGTTCTTGA TTCGGGGATT TTTAGGCGTG ATGGTTACAG TGCGCGTGTC
ATACATGTTT CTTCTATGAA CATAAATGAG ACTTCTAAAA GGAGAGAGAG CAAATGGAAT
TTGTCTAAAG CTCTTTATAG AACCTTTACA AGAACATTCG CTAAGCTAAG AGGTATGTCA
GGTTTGCCCG GTGATACAGT TGTTATGATA CCGGTGGTAC ATCTGGGAAA GTGTGCTGGG
CGTTCGCTTC AACAGCAGTG TTTTGTTGAG GCATTGTATT CTTCTATTAA GGGGTTTGGT
GATCGATCTT TACCTGAAGC TTTAGGAGTT AAAGAGGTTA GGATTTGTTG CGGCGATCCA
AAAACACATG CTGTTTTAGC TGAGTTGATG AGTCAAAAAG CTAGTGCGGG TGTAGAGATG
TAG
 
Protein sequence
MLGKRAERKA LPVGTQKKPE REDGKTHTRA DKGIGAQEVP INETSDSVSK RYISYAIFSL 
DGNIDVRKVP INQSVATVTQ EQPLYISVCP EIHVRRTPRD VSFTTLEQTG NKSGQSVNEV
GQKRGSEFSR VVRNAAKNGE KSILRAAHAV TNIEGDLISQ SAHAKSPMLL GSPSSSFKEK
EASITTSIPG LKGCVLTSDG LLGPARATKP NWSGNVVIVD VAEKIFKKCS YVGKGVSGSL
YKALGIFGTS VGKFEKREIN EGKRVLDSGI FRRDGYSARV IHVSSMNINE TSKRRESKWN
LSKALYRTFT RTFAKLRGMS GLPGDTVVMI PVVHLGKCAG RSLQQQCFVE ALYSSIKGFG
DRSLPEALGV KEVRICCGDP KTHAVLAELM SQKASAGVEM