Gene NATL1_21851 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_21851 
Symbol 
ID4779371 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp1845347 
End bp1846459 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content30% 
IMG OID640085483 
ProductNAD binding site:D-amino acid oxidase 
Protein accessionYP_001016005 
Protein GI124026890 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0665] Glycine/D-amino acid oxidases (deaminating) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.594182 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAATGA ATAGCCAAAA AACAGAAAAA AAACACACCG AAATCTCAAT TGTTGGAGGT 
GGGATAGCAG GAATTACAAC TGCCTTTCAT TTAGGGAAAA AAGGTTATCA AATAAATTTA
ATCGACCCAA CATTAAATTC AGAAATAAAT AATTTAAATC CAAAAAATGG AACACAAGCT
AGTTTGGGTG TTCTCATGGG AAATATCTAC AAAAGATCAA AAGGAAGAGC TTTTTTACTA
AGAAAAAAAA GTATGAAATT ATGGAAAGAA TGGCTTACAC AAATAAACTA TTCTGAGACA
GATTTGATTC TTGAAAAACC ATTAATTAAA TTAGCAAGTT CAGACAAAGA GTATCAATCA
ATGATTGAAT TAAGTCATAA TAAAAAAACT TATGGAATTG AACTTTTAGA TCAAAATTCT
TTAGATTTCT GGAATTCTAT ATTTGAGACA AGATTAATAG GGGGATTAAT ATCTCATGAA
GATGGTCGAT TAAATCCAAT AAAGTTAATC AAGTCATTAA TGGAAAGTCT TGATCAAATC
AAGATAAATA AAATCGAGAA AAGTGTTATT AGAATAAGTA AAAATAATAA TTTAAATGAT
AAAAGCTGGA CTATTAATCT TGAAAATAAT CAATCTATTA ATCAAGATTA TATCATCATT
TGTTCTGCAT TAAATACTCA AAATTTATTA AAACCATTAG GTCATGAAAT ACTTTTAGAA
CCAATATTAG GACAAGTTAT TGAATTAGAA TTAAAAAAAG AAACTCCGAA TTGGAAAGAA
TGGCCTGCAA TATTAAATTA TCAATCTATA AACTTTATAC ACCATGATCC CAATCGCATG
CTTATAGGAG CAACTGTCGA AAAAGGAACT AAACCAAGCC AATTAGATAA ACAAAAAATG
CTGAACCTGA GAAACGGTTC TCCAAAATGG ATGCTCAATG CAAAAGTCTG TCATGAATGG
AGCGGAATAA GAGCTAGACC AACTAATGAA GCAGCTCCCT TATTAAAACA ACTAGAACCA
GGTCTATTAA TTAATACAGG TCACTACAGA AATGGTGTTT TATTAGCTCC TGCTTGCGCC
GAATGGATAG GACTTCAAAT TGAGGGCCAA TAA
 
Protein sequence
MQMNSQKTEK KHTEISIVGG GIAGITTAFH LGKKGYQINL IDPTLNSEIN NLNPKNGTQA 
SLGVLMGNIY KRSKGRAFLL RKKSMKLWKE WLTQINYSET DLILEKPLIK LASSDKEYQS
MIELSHNKKT YGIELLDQNS LDFWNSIFET RLIGGLISHE DGRLNPIKLI KSLMESLDQI
KINKIEKSVI RISKNNNLND KSWTINLENN QSINQDYIII CSALNTQNLL KPLGHEILLE
PILGQVIELE LKKETPNWKE WPAILNYQSI NFIHHDPNRM LIGATVEKGT KPSQLDKQKM
LNLRNGSPKW MLNAKVCHEW SGIRARPTNE AAPLLKQLEP GLLINTGHYR NGVLLAPACA
EWIGLQIEGQ