| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NATL1_21691 |
|---|
| Symbol | |
|---|
| ID | 4780469 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. NATL1A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008819 |
|---|
| Strand | - |
|---|
| Start bp | 1826221 |
|---|
| End bp | 1827033 |
|---|
| Gene Length | 813 bp |
|---|
| Protein Length | 270 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 640085467 |
|---|
| Product | DNA mismatch repair MutS family protein |
|---|
| Protein accession | YP_001015989 |
|---|
| Protein GI | 124026874 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2138] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.294505 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.144731 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAGTA CTTTTGAATC TTTTTCTTCC TCTGTATTGA GTGTTTCTTC GATCAACCCC
CTCTCCTCGC CTGAAATTAT TTGTTCTCGA GTATCTAGAA TTTCTCATCA TCTCAATTTT
AATAAATTAG CTGAAAGTAC TAATACATCT TCAGATGTCC ATCAAAAGTT GTCTTTGTTA
CCAAATAGAA TTAATTGTGA GCCTCCTCAC CATTTACATT TACTAGTGCA TGGTTCTAGA
GGTGGTGAGA TACATCCATC TCTTCTGTCT TTGGTTGACC AATTAAAAAG GCATAAAAAT
CGCTCTGTTT CAATAGAGGC TTTAACTGAT GATAATCCAG AGCAAATTGA CATCGGTAAT
AGATCAGTGT TTTTAGTTCC TCTTTTTTTG TTACCTGGAA GTCATGTTTG TATTGATGTA
CCAAAAATAT TTAAACGTTT GCAAGAAGAG GGACAAAATA TAAAATTGTT TCCTTTCCTA
GGTTCTTTTA TACCATGGCT ATCATTAATA GATGATCTGA TAACTAGTCA GAGTCCTTTT
CTTAAACCTG CGTTGATTCA TCACCCTGTC TCTTCAGATA CTTCAGATGT TTTTCTTAAG
TCCTTAGAAA AATTCCTAAA TATTCCTCTT TATTCATGGT CTAGATGGAA TCAAGATACT
GTTAACAAGG AGAAGAATTA TCTTCCTATT CCCTATCTTT TGACTCCAAA CAAAAATGTA
GAAATTGATA GTAAAGGAGA GCAGCTTAAA TCTTTGCTTG AGATTGATAT TATTCATCGT
GGTCTTGTTA ATATTTTGGG TAACTTGCCA TGA
|
|---|
| Protein sequence | MKSTFESFSS SVLSVSSINP LSSPEIICSR VSRISHHLNF NKLAESTNTS SDVHQKLSLL
PNRINCEPPH HLHLLVHGSR GGEIHPSLLS LVDQLKRHKN RSVSIEALTD DNPEQIDIGN
RSVFLVPLFL LPGSHVCIDV PKIFKRLQEE GQNIKLFPFL GSFIPWLSLI DDLITSQSPF
LKPALIHHPV SSDTSDVFLK SLEKFLNIPL YSWSRWNQDT VNKEKNYLPI PYLLTPNKNV
EIDSKGEQLK SLLEIDIIHR GLVNILGNLP
|
|---|
| |